Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0571 ATGGCATTATCATCACCAACCCTGTCTCTTGTGTTGCTTTTCTTCGTGTCACTTTGTTTCTCCTATGCAACTTCTTCTCGCTTCATTCATGACCGTGCTAAACCAACACAATCACAAGCAGCAGAAAAGCTCATAAGAAGCCTTAACCTATTCCCAAAGGACTCAGTTAACATTATAAAAGGTGGTGATGACCATGATGATTTTGAACCAGGAAAAATCGTGGAGAAGAAGTTCTCGTTTCTTGGTGATTCTATTGAAGACCTTAGTCACCATGCCGGCTACTATTCACTTCCTCATTCCAAAGCTACAAGAATTTTCTACTTTTTCTTTGAATCACGGAAGAACAAGGATGATCCTGTTGTGATATGGTTGACTGGAGGACCAGGGTGTGGAAGTGAATTAGCTCTGTTTTATGAGAATGGTCCTTTTCATATTTCCAATAATTTGTCTCTTACATGGAACGATTATGGCTGGGACCAGGCATCAAATATTATATTTGTTGACCAACCTACGGGAACAGGTTTTAGTTACTCTTCTGATGACAGTGACATTCGTCATGACGAACCAGGCGTTAGCAATGACTTATATGACTTCTTGCAGGAATTTTTCAAGGCACATCCTGATTTCGTTAAGAATGACTTTTATATTACTGGAGAATCATATGCTGGACACTATATTCCGGCACTTGCATCTCGGGTTAACCAAGGAAATAAACAAAATCAAGGAATCCATATAAACCTCAAGGGTTTTGCTATTGGTAATGGATTAACAAATTCTGCAATTCAATACCAAGCATACCCAGATTTTGCATTAGACAAAGGATTAATTACAAGGGCTGATTACGATAAAATCCGCGAGTTAATCCCAGACTGTGAACAAGCTTCTAAAACTTGTGAAACTGAAGGTGGAGAAAGTTGCACGACTGCGTATAACGCTTGTGAACCCATATTCGATAATATCCTTTTCTATGCTGGCAACATTAATTACTATGACGTCAGAAAGAAATGTGAGGGAGATTTGTGCTATGACTTCAGTAAATTGGAGACTTCGTTAAACAAAAAGGAAGTGAAGAGTGCTTTAGGTGTGAGGGATGACTTGGTTTATGTTTCATGCAGTCAAATAGTGCATGAGGCTATGGTGCAAGACTTGATGAGAAACCTCGAAGTGGGGATTCCTGCTCTTCTTGAGGATGGAATCAAGTTTCTTGGGGAGAAGATTTCATATGCAATTGGCTTGGAAATTCAAGGTGGGTTCATGCCATGGAGTGGTCAGGCCAAAAGACCTTTGGAACTGTTGTTCTTTTGTAAAGTTGCGGTGTATGAGGCAGGGCACTTGGTCCCTATGGATCAACCAAAAGCTGCACTTCAGATGTTACAAAGCTGGATGGCAGGGAAATTGGCATAA 1404 0.4031 MALSSPTLSLVLLFFVSLCFSYATSSRFIHDRAKPTQSQAAEKLIRSLNLFPKDSVNIIKGGDDHDDFEPGKIVEKKFSFLGDSIEDLSHHAGYYSLPHSKATRIFYFFFESRKNKDDPVVIWLTGGPGCGSELALFYENGPFHISNNLSLTWNDYGWDQASNIIFVDQPTGTGFSYSSDDSDIRHDEPGVSNDLYDFLQEFFKAHPDFVKNDFYITGESYAGHYIPALASRVNQGNKQNQGIHINLKGFAIGNGLTNSAIQYQAYPDFALDKGLITRADYDKIRELIPDCEQASKTCETEGGESCTTAYNACEPIFDNILFYAGNINYYDVRKKCEGDLCYDFSKLETSLNKKEVKSALGVRDDLVYVSCSQIVHEAMVQDLMRNLEVGIPALLEDGIKFLGEKISYAIGLEIQGGFMPWSGQAKRPLELLFFCKVAVYEAGHLVPMDQPKAALQMLQSWMAGKLA 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0571 467 Gene3D alpha/beta hydrolase 71 466 IPR029058 -
Aed5g0571 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 177 IPR001563 GO:0004185|GO:0006508
Aed5g0571 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 154 166 IPR001563 GO:0004185|GO:0006508
Aed5g0571 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 202 227 IPR001563 GO:0004185|GO:0006508
Aed5g0571 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 434 447 IPR001563 GO:0004185|GO:0006508
Aed5g0571 467 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 33 402 - -
Aed5g0571 467 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 428 464 - -
Aed5g0571 467 ProSitePatterns Serine carboxypeptidases, serine active site. 216 223 IPR018202 GO:0004185
Aed5g0571 467 Pfam Serine carboxypeptidase 434 463 IPR001563 GO:0004185|GO:0006508
Aed5g0571 467 Pfam Serine carboxypeptidase 87 402 IPR001563 GO:0004185|GO:0006508
Aed5g0571 467 SUPERFAMILY alpha/beta-Hydrolases 88 465 IPR029058 -
Aed5g0571 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 402 IPR001563 GO:0004185|GO:0006508
Aed5g0571 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 428 464 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0571 Aed-Chr5 4168167 4174200 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0571 K16298 - gmx:100798795 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0571 5 4168167 4174200 Aed1g1091 1 10763543 10769395 PCT