Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0565 ATGGGCGCGAAAAAGAAGAATGGCGGCGGCGGAAATGGCAACAAGGAGAACGAAGACAGCAGCATCACCGTCGTCTTGAAGGTCTACATGCACTGCGACGGTTGCGCTTCCAAAATCGTCAAGCACCTCCGCAGCTTCCAAGGCGTGGAGAAGGTGGAGACGGAGAGCAACGCCGGGAAGGTAACCGTGACCGGAAAAGTGGACCCCACGAAAGTGAGGGACAACCTGGCGGAGAAGATAAAGAAGAAGGTGGAACTGATCTCTCCGCAGCCCAAGAAGGAGAACAAGGACGACACCAAACCCAACAACAACAACAGCAACAAAGCCGAGAACAAAACCCAGGACAAAAAACCCAAGGACAAAGAGGTGGTAACTACTGCGGTTCTGAAGGTGGCACTGCATTGCCAGGGTTGCCTAGACAGGATTGGCAAGACTGTGTTGAAAACCAAAGGAGTGCAAGAAATGGCCATTGACAAGGAAAAGGAGATGGTGACTGTGAAAGGGACAATGGATGTTAAGGCTCTTGCAGAGAATCTCATGGAGAAGCTTAGGAGGAAGGTTGAGGTGGTTCCTCCCAAGAAAGACAAGGACAGTGACAACAACGAAAGTGGTGGGAATGAAGGATCAGGGAAGAAGAAGAAGAAGGGTGGTGGTGGTGGTGGAGATAAGAATGAGAATATTGAAGATGGAATAGACAAAATTGGGTATAACAGAATGGAGCATTTGCCACAACCTGCTTTTGGCTTTGGTTATGGACCTTCTTATGGTTATGGGCATGGAAATGGGCATGGCACCATTGGTGGCTATAGCTATGTGCCAGTGTACCCGGAGCAGATGCATTTCCACTTGCATGCACCACCACCACAAATGTTCAGTGATGAAAACCCGAATGCTTGTTCTGTCATGTGA 909 0.4939 MGAKKKNGGGGNGNKENEDSSITVVLKVYMHCDGCASKIVKHLRSFQGVEKVETESNAGKVTVTGKVDPTKVRDNLAEKIKKKVELISPQPKKENKDDTKPNNNNSNKAENKTQDKKPKDKEVVTTAVLKVALHCQGCLDRIGKTVLKTKGVQEMAIDKEKEMVTVKGTMDVKALAENLMEKLRRKVEVVPPKKDKDSDNNESGGNEGSGKKKKKGGGGGGDKNENIEDGIDKIGYNRMEHLPQPAFGFGYGPSYGYGHGNGHGTIGGYSYVPVYPEQMHFHLHAPPPQMFSDENPNACSVM 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0565 302 MobiDBLite consensus disorder prediction 81 121 - -
Aed5g0565 302 CDD HMA 30 82 IPR006121 GO:0046872
Aed5g0565 302 Gene3D - 121 196 - -
Aed5g0565 302 Gene3D - 21 95 - -
Aed5g0565 302 Pfam Heavy-metal-associated domain 129 188 IPR006121 GO:0046872
Aed5g0565 302 Pfam Heavy-metal-associated domain 27 83 IPR006121 GO:0046872
Aed5g0565 302 SUPERFAMILY HMA, heavy metal-associated domain 124 184 IPR036163 GO:0046872
Aed5g0565 302 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3 4 302 - -
Aed5g0565 302 SUPERFAMILY HMA, heavy metal-associated domain 23 86 IPR036163 GO:0046872
Aed5g0565 302 ProSiteProfiles Heavy-metal-associated domain profile. 30 78 IPR006121 GO:0046872
Aed5g0565 302 MobiDBLite consensus disorder prediction 186 229 - -
Aed5g0565 302 CDD HMA 128 188 IPR006121 GO:0046872
Aed5g0565 302 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 4 302 IPR044594 GO:0046872
Aed5g0565 302 MobiDBLite consensus disorder prediction 81 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0565 Aed-Chr5 4125444 4127599 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0565 - - gmx:100820520 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0565 5 4125444 4127599 Aed5g0565 5 4125444 4127599 ECH
Aed1g1095 1 10812421 10813439 Aed5g0565 5 4125444 4127599 PCT