Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0563 ATGGCAGGGATCAATGTACGAAGCAGCAGCAAAAAGAGGGTTTTGGGTGGCATTTTGAACATGAAGAAGAGTGTGTTGGAAAAGCTTCAAAATAGTTGTCTATTATGGAGAAGTTACAATCAATCAAGTTCCTCGTCCTATTATGGAGATTATGAAAATCATTACACTTCGTGTGTGCCTGAGGATGTGACAGAGGGTCACTTTGTGGTGATTGCCAAGGATATTAATGATGAGGAGATCAACACAAAGAGATTCGTGGTGCCATTGAGTTGTTTAAACAACCCAAAATTCTTGATGCTATTGGAGGAATCAGCAGAAGAATATGGGTTTGAACAATATGGTGCACTTACAATTCCATGCAAGCCAAGTGAACTTGAGATGCTATTATTGGCTCGGCAATATTGGAACAAAGAAAGAGGGAGTTCTGAAACTAATTCATGGCCAAGCCAAGAACTCATACAACAAAATTATTACCGTGGTTAA 483 0.3934 MAGINVRSSSKKRVLGGILNMKKSVLEKLQNSCLLWRSYNQSSSSSYYGDYENHYTSCVPEDVTEGHFVVIAKDINDEEINTKRFVVPLSCLNNPKFLMLLEESAEEYGFEQYGALTIPCKPSELEMLLLARQYWNKERGSSETNSWPSQELIQQNYYRG 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0563 160 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE 27 134 - -
Aed5g0563 160 Pfam Auxin responsive protein 44 129 IPR003676 GO:0009733
Aed5g0563 160 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 134 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0563 Aed-Chr5 4111221 4111703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0563 60 143 Calmodulin-binding Proteins AT3G43120 35.714 3.71e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0563 - K14488 gmx:102667608 140.198
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0563 5 4111221 4111703 Aed5g0563 5 4111221 4111703 ECH