Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0557 ATGATTATTTCGTTTCTCCTCATTTTTCTTCCTTCAATATGCTCTACAATTGGCATGCGGTTTTCGAGTGTGCATGTTTGCAAATCTTCAAGTTTATATGCATTAAAGACCAAGCTCCTCTTTCTTCAGGATGAAGTAACTGTGGTGGGATTTGAAGTTCCAAAATCTCCCGATTCCAGTTACAATAATGCCTACCCTGGAAATGAAGATGAGGCAAGGGATCCACCTATGGTCCCTTCACATCTGCAGCACACTTTGCTCAATTATCCTGCTAATAGAGACACTGCAGGAACTGTTCCGATGCCCCAGAATGTGATTCTAAACCATCTTTACATCGAGAATAGAGAGTCACCAAGATCTGTGGTGGCGTTGGGATTCACTCATCGTTTCCGCTCTAAATATGTTACAGTCGTGCTTTACAAACCAGTCCAAAGAAGGGGAAATACAGGCATTTAA 456 0.4189 MIISFLLIFLPSICSTIGMRFSSVHVCKSSSLYALKTKLLFLQDEVTVVGFEVPKSPDSSYNNAYPGNEDEARDPPMVPSHLQHTLLNYPANRDTAGTVPMPQNVILNHLYIENRESPRSVVALGFTHRFRSKYVTVVLYKPVQRRGNTGI 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0557 151 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 72 142 IPR006828 GO:0005515
Aed5g0557 151 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-3 27 149 IPR030067 GO:0009744|GO:0043562
Aed5g0557 151 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 27 149 IPR043554 -
Aed5g0557 151 SUPERFAMILY AMPKBI-like 47 143 IPR037256 -
Aed5g0557 151 SMART AMPKBI_2 54 143 IPR006828 GO:0005515
Aed5g0557 151 Gene3D - 48 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0557 Aed-Chr5 4080736 4082722 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0557 - - gmx:102661902 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0557 5 4080736 4082722 Aed5g0557 5 4080736 4082722 ECH