Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0546 ATGGAAAAGCTTCCTAATAAGCAGGTTCTGATTTGCAGTTTAGTAACGGCACTTGTTTTGGTATCATGCCCAATAGTAATGTCTCGAGAAGTTGAGGACGAGAGCGAGTTCAACTATGATGTAAAGAGTGAGATAGGACCATTTAACTGGGGAGACATTAAACCCGAATGGAGTCTATGCAAAAGTGGATCAGTGCAATCTCCGATTGATTTGTTGAATGAGAGGGTTCAAATATTATCCCATTTGGGAACGCTTCAGATGAATTATCAACCATCCAATGCAACTCTTAAGAATAGGGGCCATGATATCAAGCTGGAATGGGTTTCGGGCACAAGCTATATACAAATTAATGGAACTCAGTATGTACTTAAACAGTTTCATTGGCATTCTCCCTCTGAACACACCATAGATGGCCGAAGGTACCTTTGCGCGCCTTTCAGGTTTGATTTGGAGTTACACATGGTGCATGAGACTCCATCAGGAGAAACTGCAGTGATTGGAATATTGTACAAGGCTGGAGGCAAACCAGATCCTTTCTTGTCATTGTTAACGGATAACTTAAAGGCCATTTCAAATAGTACGGGAGCAGAAAGAGAAGTGGGTGCAATGGATCCTAGGCTGGTTAAAATAGGCACAACCACAACAACACTGTATTACAGATATATTGGTTCGCTGACTACTCCTCCATGCACCGAGAATATTGCTTGGACCATGCTTAGAGAGGTGAGATCTGTTTCAAGGGAGCAAATCAGATTGCTTCGAGATGCCGTTCATGATGATTCAGATGCTAATGCAAGACCATTGCAGCCAATAAACAACCGCTTAGTGCAGCTCAATAAGCCGAAAGATCAATATTAA 858 0.4207 MEKLPNKQVLICSLVTALVLVSCPIVMSREVEDESEFNYDVKSEIGPFNWGDIKPEWSLCKSGSVQSPIDLLNERVQILSHLGTLQMNYQPSNATLKNRGHDIKLEWVSGTSYIQINGTQYVLKQFHWHSPSEHTIDGRRYLCAPFRFDLELHMVHETPSGETAVIGILYKAGGKPDPFLSLLTDNLKAISNSTGAEREVGAMDPRLVKIGTTTTTLYYRYIGSLTTPPCTENIAWTMLREVRSVSREQIRLLRDAVHDDSDANARPLQPINNRLVQLNKPKDQY 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0546 285 SUPERFAMILY Carbonic anhydrase 37 278 IPR036398 -
Aed5g0546 285 CDD alpha_CA_prokaryotic_like 46 278 IPR041891 -
Aed5g0546 285 ProSiteProfiles Alpha-carbonic anhydrases profile. 35 280 IPR001148 -
Aed5g0546 285 PANTHER BIFUNCTIONAL MONODEHYDROASCORBATE REDUCTASE AND CARBONIC ANHYDRASE NECTARIN-3 23 284 - -
Aed5g0546 285 Gene3D Alpha carbonic anhydrase 33 284 IPR036398 -
Aed5g0546 285 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Aed5g0546 285 SMART Carb_anhydrase_2a 39 280 IPR001148 -
Aed5g0546 285 Pfam Eukaryotic-type carbonic anhydrase 47 279 IPR001148 -
Aed5g0546 285 PANTHER CARBONIC ANHYDRASE 23 284 IPR023561 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0546 Aed-Chr5 3988394 3990474 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0546 K01674 - gmx:100811978 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1110 1 10926570 10928536 Aed5g0546 5 3988394 3990474 PCT
Aed5g0546 5 3988394 3990474 Aed1g1109 1 10919581 10921994 PCT