Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0518 ATGAATATTTCAACGCAGGGACTGCTTATCCTCAACGCTCGTTTCTCTTCCAATTTCTCCTTCCGAGGGTTTCGCAGGTTGTCGATTGTTCCACGTTTGCAACTGTGTCAAGGGCTGAGAAGAGGTTTCTCCAAAAACATGGCTTGCAGTGTCAGTGTGGATAATTGTGACATGGTTCATCCAGCAACAGATGCTTATTCTGGAGAGGCAGTTGAAGCTTTGAAAGCTGGGAAAGTCATTGCAGTACCCACTGATACACTCTATGGATTTGCTTGTGATGCTTGCTCAATGGAAGCAGTTAACAGAATTTATGAGATTAAAGGCCGTAGACATACAAGCCCTCTGGCTATTTGTGTCGGTGACGTATCCGATATAGCCCGCTTTGCTGTCACTGACCATTTACCTGATGGTTTGCTTGATTTCCTCCTACCTGGGCCTGTTACAGTTGTACTAAAACGAGGAGAGTCAAGTATTCTTGAACAATCTTTGAACCCGGGATTTGATAGTATAGGAATTAGAGTGCCTGATTGCAATTTCATCAGGATTATTGCCCGTGGTTCGGGAACTGCCCTAGCCCTTACCAGTGCAAACCTAAGTGGCCAGCCAAGTAGTCTTTCAATCAAAGATTTTGAGAACCTCTGGGGACACTGTGCTTTTGTTTATGATGGTGGTTTGATTCCATCAAGCCGTGCAGGTTCAACAGTCGTGGACCTCACTACACCACACAAGTACAGGATACTTAGACCTGGAAGTGCAAAGGAAGAGACAGTTGCCATCTTGGAGAAGCATTCTTTCGTTGAGGCAGAGACCACTTAA 816 0.4522 MNISTQGLLILNARFSSNFSFRGFRRLSIVPRLQLCQGLRRGFSKNMACSVSVDNCDMVHPATDAYSGEAVEALKAGKVIAVPTDTLYGFACDACSMEAVNRIYEIKGRRHTSPLAICVGDVSDIARFAVTDHLPDGLLDFLLPGPVTVVLKRGESSILEQSLNPGFDSIGIRVPDCNFIRIIARGSGTALALTSANLSGQPSSLSIKDFENLWGHCAFVYDGGLIPSSRAGSTVVDLTTPHKYRILRPGSAKEETVAILEKHSFVEAETT 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0518 271 Pfam Telomere recombination 72 250 IPR006070 GO:0003725
Aed5g0518 271 SUPERFAMILY YrdC/RibB 67 256 IPR017945 -
Aed5g0518 271 ProSiteProfiles YrdC-like domain profile. 64 252 IPR006070 GO:0003725
Aed5g0518 271 TIGRFAM TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 69 257 IPR006070 GO:0003725
Aed5g0518 271 PANTHER SUA5 17 269 - -
Aed5g0518 271 PANTHER YRDC DOMAIN-CONTAINING PROTEIN, MITOCHONDRIAL 17 269 - -
Aed5g0518 271 Gene3D DHBP synthase 55 263 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0518 K07566 - gmx:100791087 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0518 5 3733886 3736392 Aed5g0518 5 3733886 3736392 ECH