Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0515 ATGACGCAGGGGAGGATAATCGAAAATCAAGGAGCAATAAACATCAGGAGGAACAGATTTGAGAATAGGGACATCATAAGCACTATGCCTAATGACATCATTGGGAACATCGTATCTCGGTTGGAATGGAAAGATGCTGTTAGAACCAGTGTGCTTGCAACTAAATGGAGATATCACTGGACCCTTTTCGATGGGGTCTTGGACTTTGATATTTCACTTAGGAATCTTCTCTTGCGTCGAGAACATGTTGGACTTTTGACCAGGTGCATTGTTTTCACTTTGGGGGTAGAGAAGTTCAACACCTTTATGGCAAATGTGATGAACACTACACTGAAAAGCACTTCCATACAAGGACTCAGAATTTGCACGGATTTGGGTGACCCTTGGAGGTTAGCTGAGTGGATTAAGTACGCTGCTGAGAAAAATGTTCAAACTTTGGACCTGGATTTCTCATACCATTTCTTGGCACCATTTATTGAAATAAGTGAGACCATTCGCAATGTCCTTCCATCCAACAGTTTTCAAATGAAATCACTGTGTAACCTGCGTTTGTCTTCTGTGGACGTCACTGGTGAAATCATTGAGAGCCTTCTAGCATGTTGTCCACTGCTTGAATCAATTTCTGTCATTGAATCAAAACGCCTTATGAACTTGAAAGTTCAGGGTGAAGGGCTGAGGCTGAAGCATCTGGAGTTAGTTGAGTGCCACATTCTGAATCTTTTCATCTCTTCTAAAAATCTCCTGACATTTAGATACTCCGGAGATTATGGAAAGATTAAGTTTGAACATGTTCCAAGCCTTGTCGAAGCTTCCTTTGGAGGAATCTTTTGCAGTTACATGCAATCTAACGTGGAAAAAAATGATTTTTATGCAATAGTGATGCTTGTTGATGTTCTGAAATTGGAAATGTCCATACCGTATCCGGATTGTCTTGAAGACCTACCTGTGTTTCATAATGTGAGGCAGCTGGAATTTCGAATTCCTCACGAGTGTGGAGCGCCTCTTGGTCGTGCTGTTACTTTACTAAGATCATTCCCTTCAATATCTGTGCTTAAGATTAAGTTCCAAAGGACCGATATCAGCGCAGTGCAGATATGGGTGGCTCATATAATACATGAGTATCCAAACCTGAGGGAACTAGAAGTCTCAGGATACAGAAAAGACCCCAGTCAAATTGAGTTGCTGACCAGCATATTTGAGCATGCTCCTAATCTCAACAAAGTTGTTGTGGATCCGTTGTGTTCCATGTATGTGAATAGGTCACCTGCTGTCAAGACCAAGCTTAGAGAATTGAACCGTGAGAACACCACATGGCTTGCTGATTCCCTCAAACCATATCTGCCTCCTCTAGCTGAGTTGATTGTCCTATGA 1371 0.4194 MTQGRIIENQGAINIRRNRFENRDIISTMPNDIIGNIVSRLEWKDAVRTSVLATKWRYHWTLFDGVLDFDISLRNLLLRREHVGLLTRCIVFTLGVEKFNTFMANVMNTTLKSTSIQGLRICTDLGDPWRLAEWIKYAAEKNVQTLDLDFSYHFLAPFIEISETIRNVLPSNSFQMKSLCNLRLSSVDVTGEIIESLLACCPLLESISVIESKRLMNLKVQGEGLRLKHLELVECHILNLFISSKNLLTFRYSGDYGKIKFEHVPSLVEASFGGIFCSYMQSNVEKNDFYAIVMLVDVLKLEMSIPYPDCLEDLPVFHNVRQLEFRIPHECGAPLGRAVTLLRSFPSISVLKIKFQRTDISAVQIWVAHIIHEYPNLRELEVSGYRKDPSQIELLTSIFEHAPNLNKVVVDPLCSMYVNRSPAVKTKLRELNRENTTWLADSLKPYLPPLAELIVL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0515 456 SUPERFAMILY F-box domain 22 67 IPR036047 GO:0005515
Aed5g0515 456 Gene3D Ribonuclease Inhibitor 159 416 IPR032675 -
Aed5g0515 456 PANTHER - 9 415 - -
Aed5g0515 456 SUPERFAMILY RNI-like 141 410 - -
Aed5g0515 456 PANTHER F-BOX PROTEIN-LIKE 9 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0515 Aed-Chr5 3702064 3703914 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0515 - - gmx:100778140 631.328