Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0514 ATGACAAAGAAAATACGTTTGGATTGTTCCTTGCAGGAGGATGAAGAGAAGGTGAATAATAGCTTTATGGGATTGGATACAAGGGAAGGAGTGAATGATGGTTTTCCTAGAGTTGGACCAAATGATTCGCTTCTCCCTGGTCTTTTTGATGATGTTGCGCTGAATTGTCTTGCTTGGGTTAGTAGATCTGATTATGCTTCACTAGCATGCATAAATAAAAGGTACAACTTGCTGATTAGGAGCGGATATCTATCCGGGTTGAGGAAGAAGTTGGGGATTGTGGAGCTAGAGCATTTGGTTTATTTGGTTTGTGATCCAAGAGGGTGGGAGGCATTTGACCCCAAGAGGAATAAATGGATAACATTACCTAAGATACCTTGTGATGAGTGTTTTAACCATGCAGACAAGGAGTCCTTGGCTGTGGGGAGTGAGTTGTTGGTTTTTGGTCGGGAATTGATGGATTTTGCCATTTGGAAGTACAGCTTGATTTCTCGTGGTTGGGTGAAGTGTAAGGAGATGAACCGTCCTCGTTGCTTGTTTGGATCTGGCAGTCTTGGTTCGATTGCTATTGTTGCTGGTGGAAGTGATAAATATGGAAATGTTCTTGAATCGGCAGAGTTGTATGACTCAAATTCAGGTACATGGGAACTGCTGCCGAACATGCATACACCACGCAGATTGTGCTCTGGTTTATTTATGGATGGAAAATTCTATGTGATTGGTGGCATGTCAAGTCCTACTGTTTCATTGACTTGTGGGGAGGAGTACGATCTTAAGACGAGAAATTGGCGGAAAATAGAGGGTATGTATCCATATGTTAATGGGGCAGCTCAGGCACCTCCACTTGTGGCAGTTGTGGATAACCAGTTGTATGCAGTTGAGCATCTCACCAACATGGTGAAGAAATATGACAAGGAAAATAACACCTGGAGTGAATTGGGAAGGCTTCCAGTTCGGGCCGATTCTTTGAATGGATGGGGCCTGGCTTTCAAGGCTTGTGGAGAGAAACTTCTGGTTGTGGGTGGACAAAGGGGTCCAGAAGGTGAAGCTGTTGTACTGAATTCATGGTGTCCTAGAACAGGAGTCAGGAATGGAACCATAGATTGGCAAGTACTTGGTGTGAAGGAGCATGTTGGGGTGTTTGTGTACAATTGTGCTGTTATGGGATGGTCTGGTGAGATGCTTTTAGATTGA 1194 0.4405 MTKKIRLDCSLQEDEEKVNNSFMGLDTREGVNDGFPRVGPNDSLLPGLFDDVALNCLAWVSRSDYASLACINKRYNLLIRSGYLSGLRKKLGIVELEHLVYLVCDPRGWEAFDPKRNKWITLPKIPCDECFNHADKESLAVGSELLVFGRELMDFAIWKYSLISRGWVKCKEMNRPRCLFGSGSLGSIAIVAGGSDKYGNVLESAELYDSNSGTWELLPNMHTPRRLCSGLFMDGKFYVIGGMSSPTVSLTCGEEYDLKTRNWRKIEGMYPYVNGAAQAPPLVAVVDNQLYAVEHLTNMVKKYDKENNTWSELGRLPVRADSLNGWGLAFKACGEKLLVVGGQRGPEGEAVVLNSWCPRTGVRNGTIDWQVLGVKEHVGVFVYNCAVMGWSGEMLLD 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0514 397 Pfam Kelch motif 176 221 IPR006652 GO:0005515
Aed5g0514 397 Pfam Kelch motif 224 269 IPR006652 GO:0005515
Aed5g0514 397 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 34 389 - -
Aed5g0514 397 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 34 389 - -
Aed5g0514 397 SUPERFAMILY Kelch motif 108 347 IPR015915 GO:0005515
Aed5g0514 397 SMART kelc_smart 236 288 IPR006652 GO:0005515
Aed5g0514 397 SMART kelc_smart 188 235 IPR006652 GO:0005515
Aed5g0514 397 Gene3D - 100 374 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0514 Aed-Chr5 3698706 3699899 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0514 48 267 Miscellaneous Gene Families AT4G33900 27.273 2.40e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0514 - - gmx:100792139 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0514 5 3698706 3699899 Aed5g0514 5 3698706 3699899 ECH