Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0510 ATGAAGAACCAATCTCTCTTCTTCTCATTTGCACTGCTAGTTTCATTTTTGTATCTCACCACCTCTTTAGCCCAATTAGCACCAGCTTCTGCACCTGTAAAACCAGTTCAACCTACCCCTACCCCACCAACTGCGGCTCCTCAGCAACCGTTGGTTCCCTCACTGCCAGAGTCACCAAGTGATTCGACCCCTGACACTACTACTGCAGCTGTTGACATTGTTGGAGTCCTGAGGAAGGCTAAGTCATTCAACATCCTAATCCGTCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCTCAGCTCCTCACTACTAAATCTGGTGGCATCACAATTCTTGCACCTGATGACAGTTCCTTCTCAGAACTCAAAGCTGGCTTCCTCAACTCTCTCTCTGATGGCCAAAAGCTCGAACTTCTTCAATTCCACGTTATTTCAGAATATGTGTCTAGCTCCAACTTTGATACACTCACCAACCCTGTGAGAACACTAGCAGGGGCTAAACCTGGAAAGGTGGAACTGAATGTGATAAGTTACGGAGGGAGTGTGAACATCTCAACGGGTGAGGTTAACACCACCATCTCTGGCATTATATATACTGATAAACATCTTGCTATTTATAAGGTTGGGAAAGTGCTTCTTCCTATGGACTTCTTCACTGTTGCCAAGGCACCTGCAAAGGGACCCTCTTTGGCACCAGAACCTTCAGCAAAGGCTCCTACAGCTGATAAGGATCCATTATCCCCAGATTCCTCAGAATCTTCTCAAACTAATCCCACAAAAGATACCTCTGGCACTGTGAAAATCAATGTGCATGGAAAGTGGGTGTCCCTTGTTCTTGGACTAGTTCTCATGATTGTATTCTCATCATAA 876 0.4521 MKNQSLFFSFALLVSFLYLTTSLAQLAPASAPVKPVQPTPTPPTAAPQQPLVPSLPESPSDSTPDTTTAAVDIVGVLRKAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSSFSELKAGFLNSLSDGQKLELLQFHVISEYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTISGIIYTDKHLAIYKVGKVLLPMDFFTVAKAPAKGPSLAPEPSAKAPTADKDPLSPDSSESSQTNPTKDTSGTVKINVHGKWVSLVLGLVLMIVFSS 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0510 291 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 6 289 - -
Aed5g0510 291 MobiDBLite consensus disorder prediction 228 267 - -
Aed5g0510 291 Gene3D FAS1 domain 54 216 IPR036378 -
Aed5g0510 291 MobiDBLite consensus disorder prediction 248 267 - -
Aed5g0510 291 SMART fasc_3 112 217 IPR000782 -
Aed5g0510 291 MobiDBLite consensus disorder prediction 32 66 - -
Aed5g0510 291 ProSiteProfiles FAS1/BIgH3 domain profile. 70 214 IPR000782 -
Aed5g0510 291 Pfam Fasciclin domain 82 216 IPR000782 -
Aed5g0510 291 MobiDBLite consensus disorder prediction 33 54 - -
Aed5g0510 291 SUPERFAMILY FAS1 domain 69 217 IPR036378 -
Aed5g0510 291 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 6 289 IPR045003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0510 Aed-Chr5 3682420 3683295 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0510 - - gmx:100790242 453.366