Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0503 ATGTTGAAAAAACATTCTGTCTTGTCCTTCTCACTAGCATTGTTACTTTCATTGTTGTATTCCACCACCACCTTAGCCCAATTAGCACCAGCTTCTGCACCTGCAAAACCAACCCAACCTACCCCTACCACGCCTGCTGCAGCACCTCAACAACCATTGGTTCCCTCATTGCCAGAGTCACCAAGTGATTCGACCCCTGACACTACTACTGCAGCTGTTGACATTGTTGGAGTCCTCAGGAAGGCTAAGTCATTCAACATCCTAATCCGCCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCACAGCTTCTCACTACTAAATCTGGTGGCATAACCATTCTTGCCCCAGATGATAGTGCCTTTTCAGAACTCAAAGCTGGCTTCCTCAACTCTCTTTCTGATGGACAAAAGCTTGAACTTCTTCAATTCCACGTTATTTCAGAATATGTGTCTAGCTCTAACTTTGATACACTAACCAACCCTGTGAGAACACTAGCAGGAGCTAAACCTGGAAAGGTGGAACTGAATGTGATAAGTTACGGAGGGAGTGTGAACATCTCAACAGGTGAGGTTAACACCACCATCTCTGGCATTGTATATACCGATAAGCATCTTGCTATTTATAAGGTTGGGAAAGTGCTTCTTCCTATGGACTTCTTCACTGTTGCTAAGGCTCCTGCAAAGGCACCCTCTTTGGCTCCAGAACCTTCAAGTGATGCGGCAAAGGCGCCTAAAGCTGATAAGGATGACTCATCTTCTTCAGATTCGTCACAGGTTAATGCCTCTGAACAGAACTCTGGCACCGAGAAGATCAGTGTGTACGGAATGTGGGTGTCACTTGGTCTTGGACTTGCATTGGTGGCAACAGCTATGCAAACTTAA 888 0.455 MLKKHSVLSFSLALLLSLLYSTTTLAQLAPASAPAKPTQPTPTTPAAAPQQPLVPSLPESPSDSTPDTTTAAVDIVGVLRKAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSAFSELKAGFLNSLSDGQKLELLQFHVISEYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTISGIVYTDKHLAIYKVGKVLLPMDFFTVAKAPAKAPSLAPEPSSDAAKAPKADKDDSSSSDSSQVNASEQNSGTEKISVYGMWVSLGLGLALVATAMQT 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0503 295 Gene3D FAS1 domain 56 218 IPR036378 -
Aed5g0503 295 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 293 - -
Aed5g0503 295 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 293 IPR045003 -
Aed5g0503 295 MobiDBLite consensus disorder prediction 231 269 - -
Aed5g0503 295 SUPERFAMILY FAS1 domain 71 219 IPR036378 -
Aed5g0503 295 Pfam Fasciclin domain 84 218 IPR000782 -
Aed5g0503 295 SMART fasc_3 114 219 IPR000782 -
Aed5g0503 295 MobiDBLite consensus disorder prediction 31 68 - -
Aed5g0503 295 MobiDBLite consensus disorder prediction 35 56 - -
Aed5g0503 295 ProSiteProfiles FAS1/BIgH3 domain profile. 72 216 IPR000782 -
Aed5g0503 295 MobiDBLite consensus disorder prediction 255 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0503 Aed-Chr5 3656262 3657149 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0503 - - gmx:100794781 375.555