Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0502 ATGTCATCAAAGCATCAAATCCTCGTTGCAATATCATCTAAACCTCCTTTTAACAAAACCAAAATGATGAAGAAGCAATTTGCCTTTCCCTTCTCACTAGCACTAGCACTACTAGTTTCACTTTTGTATTCCCCCACCACATTAGCTCAATTAGCACCAGCTGTTGCACCTGTAAAACCAGTCCAACCTACCCCTACCTCTACCCCACCCACTGCGGCTCCTCAGCAACCATTGGTTCCCTCATTGCCAGAATCACCAAGTGATTCCGCCCCTGACACTACTGCATCAGTTGATATTGTAGGAGTCCTGAGGAAGGCAAAGTCATTCAACATCCTAATCCGACTCATGAAAACCACCCAATTGATCAACCAACTCAATGCTCAGCTCCTCACTACTAAATCTGGTGGCATCACAATTCTTGCACCTGATGACAGTTCCTTCTCAGAACTCAAAGCTGGCTTCCTCAACTCTCTCTCTGATGGCCAAAAGCTTGAACTTCTTCAATTCCACGTTATTTCAGAATATGTGTCTAGCTCCAACTTTGATACACTCACCAACCCTGTGAGAACACTAGCAGGGGCTAAACCTGGAAAGGTGGAACTGAATGTGATAAGTTACGGAGGGAGTGTGAACATCTCAACGGGTGAGGTTAACACCACCATCTCTGGCATTGTATACACTGATAAACATCTTGCTATTTATAAGGTTGGGAAGGTGCTTCTTCCTATGGACTTCTTCACTGTTGCGAAGGCACCTGCGAAGGCACCCTCATTGGCTCCAGAACCTTCAAGTGATTCAGCAAAGGCGCCTAAAGCTGATAAGGATGACTCATCATCTTCAGATTCGTCACAGGTTAATGCCTCTGAACAGAACTCTGGCACCGAGAAGATCAGTGTGTACGGAATGTGGGTGTCATTTGGACTTGCATTGGTGGCAATAGCAATGCAAACTTAA 954 0.4528 MSSKHQILVAISSKPPFNKTKMMKKQFAFPFSLALALLVSLLYSPTTLAQLAPAVAPVKPVQPTPTSTPPTAAPQQPLVPSLPESPSDSAPDTTASVDIVGVLRKAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSSFSELKAGFLNSLSDGQKLELLQFHVISEYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTISGIVYTDKHLAIYKVGKVLLPMDFFTVAKAPAKAPSLAPEPSSDSAKAPKADKDDSSSSDSSQVNASEQNSGTEKISVYGMWVSFGLALVAIAMQT 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0502 317 SUPERFAMILY FAS1 domain 93 243 IPR036378 -
Aed5g0502 317 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 30 310 - -
Aed5g0502 317 Gene3D FAS1 domain 81 242 IPR036378 -
Aed5g0502 317 MobiDBLite consensus disorder prediction 255 293 - -
Aed5g0502 317 ProSiteProfiles FAS1/BIgH3 domain profile. 96 240 IPR000782 -
Aed5g0502 317 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 30 310 IPR045003 -
Aed5g0502 317 MobiDBLite consensus disorder prediction 279 293 - -
Aed5g0502 317 Pfam Fasciclin domain 108 242 IPR000782 -
Aed5g0502 317 MobiDBLite consensus disorder prediction 58 81 - -
Aed5g0502 317 SMART fasc_3 138 243 IPR000782 -
Aed5g0502 317 MobiDBLite consensus disorder prediction 58 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0502 Aed-Chr5 3653494 3654447 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0502 - - gmx:100794280 394.045