Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0500 ATGATGAAGAAGCAATCTTTCTTGTCCTTCTCACTAGCACTGCTAGTTTCATTTATGTATCTCACCACCACTTTAGCCCAATTAACACCAGCTACTGCACCTGTAAAACCAGTCCAACCTGCCCCTACTATACCAGCTGCGGCACCTCAACAACCATTGGTTCCCTCATTGCCAGAGTCACCAAGTGATTCGATTCCTGACACTACTACTGCAGCTGTTGACATTGTTGGAGTCCTCAGGAAGGCTAAGTCATTCAACATCCTAATCCGTCTCATGAAAACCACCCAATTAATCAACCAACTCAATGCACAACTCCTCACTACTAAATCAGGTGGCATTACCATTCTTGCACCTGATGACAGTTCCTTCTCTGAACTCAAAGCTGGCTTCCTCAACTCTCTCTCTGATGGCCAAAAGCTTGAACTTCTTCAATTCCACGTTATTTCAGAATATGTGTCTAGCTCCAACTTTGATACACTCACTAACCCTGTGAGAACACTAGCAGGAGCTAAACCTGGAAAGGTGGAACTGAATGTGATAAGTTACGGAGGGAGTGTGAACATCTCAACGGGTGAGGTTAACACCACCATCTCTGGCATTGTATATGCTGATAAGCATCTTGCTATTTATAAGGTTGGGAAGGTGCTTCTTCCTATGGACTTCTTCACTGTTGCTAAGGCACCTGCAAAGGGACCTTCTCTGGCACCAGAACCATCTGCAAAGGCTCCTAAAGCGGATAAGGAGAAGTCACTGTCTCCAGATTCCTCAGAATCATCTGAGATTAGTTCCACAAAAGACAACTCTGGCACTGTGAAAATCAATGTGCATGGAATGTGGGTGTCCCTTGTTCTTGGAGTACTTATCATGAGTGTGATGATAACATAA 885 0.4441 MMKKQSFLSFSLALLVSFMYLTTTLAQLTPATAPVKPVQPAPTIPAAAPQQPLVPSLPESPSDSIPDTTTAAVDIVGVLRKAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSSFSELKAGFLNSLSDGQKLELLQFHVISEYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTISGIVYADKHLAIYKVGKVLLPMDFFTVAKAPAKGPSLAPEPSAKAPKADKEKSLSPDSSESSEISSTKDNSGTVKINVHGMWVSLVLGVLIMSVMIT 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0500 294 Gene3D FAS1 domain 58 218 IPR036378 -
Aed5g0500 294 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 293 - -
Aed5g0500 294 SMART fasc_3 114 219 IPR000782 -
Aed5g0500 294 MobiDBLite consensus disorder prediction 40 56 - -
Aed5g0500 294 MobiDBLite consensus disorder prediction 229 267 - -
Aed5g0500 294 ProSiteProfiles FAS1/BIgH3 domain profile. 72 216 IPR000782 -
Aed5g0500 294 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 293 IPR045003 -
Aed5g0500 294 Pfam Fasciclin domain 84 218 IPR000782 -
Aed5g0500 294 SUPERFAMILY FAS1 domain 71 219 IPR036378 -
Aed5g0500 294 MobiDBLite consensus disorder prediction 40 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0500 Aed-Chr5 3648533 3649417 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0500 - - gmx:100776667 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0500 5 3648533 3649417 Aed5g0500 5 3648533 3649417 ECH