Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0497 ATGTATGTTATTTCAAAAATATCTGAACTGCATAATGCAGGAATTATTAGACAGCCTAAGTGGGGTCACCTTAAAGACGTGCATAAGGCCATAAAACTTTGTGAAGAAGCACTGATAACTACTGATCCAACAATTACATCTCTTGGACCAAATATAGAGATTAATTCTGCATCTATGATTTCAAGCTTCACAGCTGAATCTTTAAAAGAAGAGGTTGGCTCTCTGAATGATTCTGGCTCAGGATGGAGTTGGATAAGTGAACCAATCGGTATTTCAAAGGCTGATTCATTCTCAAAATTTGGATTACTGGAGCAAATAAACACAACTGCTGATAGAAGTGATTATTTGTGGTACTCATTAAGCATTGATCTTGATTATGGTGCCCAAATTGTCCTTCACATTGAATCCCTTGGCCATGCTCTTCATGCTTTCATAAATGGGAAGTTTTCAGGGAGTGGATCGGGCAACCATGAGAAACCTAAGGTCAAAGTAGACATCCCCATCACACTAGTGGCTGGGAAGAACACAATTGATCTCCTGAGTTTAACTGTGGGACTTCAGAACTATGGAGCATTTTATGACACATGGGGTGCGGGGATCACTGGTCCAGTGATATTGAAAGGTTTCAAGAATGGCAGCACTCTTGATCTCTCCTCCAAGAAGTGGACATATCAGGTTGGCCTTAAAAATGAAGATTTAGGTCCATCTAGTGGCAGTTCTGGACAGTGGAATTCACAATCTACCTTACCTACAAATCAACCCTTGACTTGGTACAAGGCATGCATTGGATCAAGAAGTTGTAGAATTGAACTATCAATTAATACATTCAGAGATCCATGTAAAGGAATAATAGCAAAGAGTTTAGCTGTCGAAGCTTCTTGTGCATAG 888 0.3975 MYVISKISELHNAGIIRQPKWGHLKDVHKAIKLCEEALITTDPTITSLGPNIEINSASMISSFTAESLKEEVGSLNDSGSGWSWISEPIGISKADSFSKFGLLEQINTTADRSDYLWYSLSIDLDYGAQIVLHIESLGHALHAFINGKFSGSGSGNHEKPKVKVDIPITLVAGKNTIDLLSLTVGLQNYGAFYDTWGAGITGPVILKGFKNGSTLDLSSKKWTYQVGLKNEDLGPSSGSSGQWNSQSTLPTNQPLTWYKACIGSRSCRIELSINTFRDPCKGIIAKSLAVEASCA 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0497 295 PANTHER BETA-GALACTOSIDASE RELATED 54 259 IPR001944 GO:0004553|GO:0005975
Aed5g0497 295 PANTHER BETA-GALACTOSIDASE RELATED 259 287 IPR001944 GO:0004553|GO:0005975
Aed5g0497 295 PANTHER BETA-GALACTOSIDASE RELATED 11 54 IPR001944 GO:0004553|GO:0005975
Aed5g0497 295 PANTHER BETA-GALACTOSIDASE 54 259 - -
Aed5g0497 295 PANTHER BETA-GALACTOSIDASE 259 287 - -
Aed5g0497 295 PANTHER BETA-GALACTOSIDASE 11 54 - -
Aed5g0497 295 SUPERFAMILY Galactose-binding domain-like 82 209 IPR008979 -
Aed5g0497 295 Gene3D - 214 295 IPR043159 -
Aed5g0497 295 Gene3D - 62 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0497 Aed-Chr5 3633391 3636723 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0497 14 283 Glycoside Hydrolase AT2G28470 50.000 2.43e-91 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0497 - - pvu:PHAVU_011G075900g 417.542