Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0496 ATGATGAAAAAACAATCTCTCTTCTCCTTCTCACTAGCACTTTTAGTTTCATTTTTGTATCTCACCACCACATTAGCCCAATTATCACCAGCTGCTGCCCCTCTAAAACCACCCCAACCTACCCCTACTCCGCCGGCTGCGGCACCTCAACAACCATTGGTTCCCTCATTGCCAGAGTCACCAAGTGATTCGACCCCTGACACTACTACTGCAGCTGTTGACATTGTTGGAGTCCTCAGGAAGGCTAAGTCATTCAACATCCTAATCCGCCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCTCAGCTCCTCACTACTAAATCTGGCGGCATAACCATTCTTGCACCCGATGATAGTTCCTTCTCAGAACTCAAAGCTGGCTTCCTCAACTCTCTCTCTGATGGCCAAAAGCTTGAACTTCTTCAATTCCACGTTATTTCAGAATATGTGTCTAGCTCCAACTTTGATACACTCACTAACCCTGTGAGAACACTAGCAGGAGCTAAACCCGGAAAGGTGGAACTGAATGTGATAAGTTACGGAGGGAGTGTGAACATCTCAACGGGTGAGGTTAACACCACCATCTCCGGCATTATATATACTGATAAGCATCTTGCTATTTATAAGGTTGGGAAAGTGCTTCTTCCCATGGACTTCTTCACTGTTGCTAAGGCACCTGCAAAGGGACCTTCTCTGGCACCAGAACCTTCAAGTGATGCAGCAAAGGCACCTAAAGCTGATAAGGATGAGTCATCATCTTCAGATGCATCACAGGTTAATTCCACTGGACAGAACTCTGGCACCGAGAAGATCAGTGTGTATGGAATGTGGGTGTCACTTGTTCTTGGAGTAAACAATAGCATATTAGAGTCCCCACTGTGCAAAACAATCATTATAACATTCCAAAACACAAAAATGATGATGCAACAATCTCTCTTCTTCTGTGCCTCACTGGTACTTATGATAGTCACCACATCAGCCCAACACTCACCAGCAGCATCTCCAACAATACCAACATTACCAAAAACACCCCTGGCATCTCCACCGGGAATGAATACTGTTCCATTGGTACCAGTGTCCCCCAATGGTGCCCCTACACCCGCCACCCCTAAAGCTCCCACCTTTGACATTGCTCAAATACTGAGTAAGGCTAAGAGATTTTCTGTTCTGATTCGGCTTCTGAAGACGACCCAGTTGATCAACCAACTCAACTCTCAACTCCTCACATCGGGTTCTGGAGGATTGACCATTTTCTCCCCATCTGATTCTTCCTTCTCAAAGCTAAAAGCAGGTTTCCTCAACTCACTCAACGACAGGCAAAAGGTGGAACTTTTACAATTCCACACACTTTCTTCCTTCATCTCAATCTCCAACTTCGACACTCTCACCAACCCAGTTCAGACCCAAGCCGGTGACGACTCCCAAAGGCTACAACTTAACGTCACCACTTACGGCAGCAACAAAGTGAGCATGGCCACCGGCGCCGTCAATGCCACCGTTACCGGCACAGTGTACACGGACAACAAGCTTGCCATTTATGAAGTGGACAAGGTGCTTCTTCCACTTGATGTCGTTCTTCCCAAGCCTAAGGCTCCGGCACCTTCACCATCTAAAGGAGAATTGCCTAAAACGAAGTCATCTGCAGACAAAAGTGGTGATAGTAACAAAAATAGTGATGCTGCTACAGTGGACGCTTCTGCTGGTTCCATGAATTTCAACGGCGTACATGTAATGTGGATGCCTTTTGTTGTTGGGTTCGCTTTCATGTTTGGAGCCATGATATGA 1791 0.4629 MMKKQSLFSFSLALLVSFLYLTTTLAQLSPAAAPLKPPQPTPTPPAAAPQQPLVPSLPESPSDSTPDTTTAAVDIVGVLRKAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSSFSELKAGFLNSLSDGQKLELLQFHVISEYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTISGIIYTDKHLAIYKVGKVLLPMDFFTVAKAPAKGPSLAPEPSSDAAKAPKADKDESSSSDASQVNSTGQNSGTEKISVYGMWVSLVLGVNNSILESPLCKTIIITFQNTKMMMQQSLFFCASLVLMIVTTSAQHSPAASPTIPTLPKTPLASPPGMNTVPLVPVSPNGAPTPATPKAPTFDIAQILSKAKRFSVLIRLLKTTQLINQLNSQLLTSGSGGLTIFSPSDSSFSKLKAGFLNSLNDRQKVELLQFHTLSSFISISNFDTLTNPVQTQAGDDSQRLQLNVTTYGSNKVSMATGAVNATVTGTVYTDNKLAIYEVDKVLLPLDVVLPKPKAPAPSPSKGELPKTKSSADKSGDSNKNSDAATVDASAGSMNFNGVHVMWMPFVVGFAFMFGAMI 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0496 596 MobiDBLite consensus disorder prediction 231 268 - -
Aed5g0496 596 Gene3D FAS1 domain 376 523 IPR036378 -
Aed5g0496 596 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 283 - -
Aed5g0496 596 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 319 571 - -
Aed5g0496 596 Pfam Fasciclin domain 84 218 IPR000782 -
Aed5g0496 596 Pfam Fasciclin domain 388 523 IPR000782 -
Aed5g0496 596 ProSiteProfiles FAS1/BIgH3 domain profile. 72 216 IPR000782 -
Aed5g0496 596 SUPERFAMILY FAS1 domain 71 219 IPR036378 -
Aed5g0496 596 ProSiteProfiles FAS1/BIgH3 domain profile. 376 521 IPR000782 -
Aed5g0496 596 MobiDBLite consensus disorder prediction 531 563 - -
Aed5g0496 596 MobiDBLite consensus disorder prediction 32 68 - -
Aed5g0496 596 Gene3D FAS1 domain 56 218 IPR036378 -
Aed5g0496 596 SMART fasc_3 418 524 IPR000782 -
Aed5g0496 596 SMART fasc_3 114 219 IPR000782 -
Aed5g0496 596 MobiDBLite consensus disorder prediction 33 56 - -
Aed5g0496 596 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 319 571 IPR045003 -
Aed5g0496 596 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 283 IPR045003 -
Aed5g0496 596 SUPERFAMILY FAS1 domain 367 524 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0496 Aed-Chr5 3628905 3632329 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0496 - - gmx:100819829 460.685