Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0495 ATGAAACAAGCAGCCCTTTTCTCCTTCTCACTCTTCCTAATCCTTTCTTCCACCACAATGGCCATTTCACCAGCACCTGCAGCAGCCCCAAAAGCCCCAGCAGCAAAAACTCCCCATACCCCAAAGGCCACAGCACCATCACCAAAACCATTAGTCCCCACATTACCTCAGTCTCCAGACTCACCCGACTCTGTCCCTGATGACATCACTAGAATCCTCAAAAAGGCCAAAATGTTCTCAGTGCTAATCCGGCTACTGAAAACGACAGAAATAATGAACAACATAAACTCACAGCTGATAACAGCAAAGAGTGGGGGCATAACAATCCTTGCACCAGATGATTCTGCCTTTTCCAACCTCAAAGCAGGTTTCCTCAACTCCCTTAACGAAGGCCAGAAGATCGAACTTGTGCAGTTCCACATATTGCCTGAGTTTGTGTCCACCTCTAACTTCGATTCTCTAAGCAACCCTGTCCAGACAGTGGCTGGTAAAGACCCTGCAAGGCTTCCATTGAATGTGAATGCATTAGGTAACAGTGTCAACATTTCAACTGGGGTCGTCAATGCCACCATGCTCGGGGTAGTGTACTCGGATAACAAACTTGGGATATATCACATCGACAAGGTGCTTCTTCCTCTTGATTTCTTCATAACCAATAAAGCTCCAGCTTTGGCTCCAACATCACTTGCAAAAGCTCCCAAAGCTGCTAAGGATAACTCTTCAGAGGATGATCAAGACGAAACAAACCAGGATGGGAAGAAATCCGGGGCAGTGAGTTTGGTTAGCATTGGTGGAACAAAGTTGATGTCACTTGGGATAATTTTGGTCGCAGTAGGAACCATGTATAACATTGAGCGGGCAATGAAGCAGCCAAAGAGTGAAGACAGTAGCACTATGTTCCGAACTGATAACAAACCATTTAAGATTAACACGTGCAATTTTACTGCGAACAATTCACACCAAATTCTAATGCAAAACCAAAAATGTGGACTGAGAATTGGAGTGGATGGAATTATTAGACAGCCTAAGTGGGGTCACCTTAAAGATGTGCATAAGGCAATAAAACTTTGTGAAAAAGCAATGATAGCTACTGATCCAACAATTACATCTCTTGGATCAAATATAGAGATTAATTCTGTATCTATGATTTCAGGCTTCAAAACTGAATCTTTAGAAGAAGAGGTTGGTTCTTTGAATGATTCTGGCTCAGGATGGAGTTGGATAAGTGAACCTATCGGTATTTCAAAGGCTGATTCATTCTCAAAATTTGGGTTACTGGAGCAAATAAATACAACAGCTGATAAAAGTGATTACTCGTGGTATTCATTAAGCATTGATCTTGATGCTGCTACTCAAATTGTCCTTCACATTGAGTCCCTCCGTCATGCTCTTCATGCTTTCATAAATGGGAAGCTTGCAGGGAATGGAACAGGCAACCATGAGAAAGCTAAGGTCAAAGTAGAAATCCCCATCATACTGGTGGCTGGGAAGAACAAAATTGATCTCCTGAGTTTAACTGTGGGACTTCAGAACTATGGAGCCTTTTTTGACACATGGGGTGCAGGGATCACTGGTCCAGTGATATTGAAAGGTTTCAAGAATGGTAGTACTCTTGATCTCTCATCCCAGAAGTGGACATATCAGGTTGGCCTTAAAGGTGAAGATTTTGGTCTATCTAGTGGCAGTTCTGGACAGTGGAATTCACAATCTACCTTACCTATGAATCAACCGTTGATTTGGTACAAGCATCGGTTGAAATTCGAAATTCTCAAATACCATGTACCGCGATCATGGTTACAACCAGATAGCAACACACTTGTGTTGTTTGAGGAAAGTGGAGGCAACCCTAAGCAAATCTCTTTTGCTACAAGACAGATAGGAAGTGTGTGTTCACATGTATCTGAATCTCACCCACCACCAGTAGACTCATGGAATTCAGATACAGAATCAGGAAGAAAAGTAGTTCCTGTAGTGTCACTGGAGTGCCCGTATCCTAATCAGGTGATCTCATCCATTGTATTTGCAAGTTTCGGAACGCCTCTTGGGACATGCGGGAACTTCAAACATGGACGATGCAGCAGCAATATTAATAAGGCTCTATCCATTGTGCAGAAGGCCTGCATTGGTTCAAGCAACTGTAGAATTGAACTATCAACTAATGCATTCGGAGATCCATGTAAAGGAGTAACAAAGAGTTTAGCTGTTGAAGCTTCTTGTGCATAG 2223 0.4278 MKQAALFSFSLFLILSSTTMAISPAPAAAPKAPAAKTPHTPKATAPSPKPLVPTLPQSPDSPDSVPDDITRILKKAKMFSVLIRLLKTTEIMNNINSQLITAKSGGITILAPDDSAFSNLKAGFLNSLNEGQKIELVQFHILPEFVSTSNFDSLSNPVQTVAGKDPARLPLNVNALGNSVNISTGVVNATMLGVVYSDNKLGIYHIDKVLLPLDFFITNKAPALAPTSLAKAPKAAKDNSSEDDQDETNQDGKKSGAVSLVSIGGTKLMSLGIILVAVGTMYNIERAMKQPKSEDSSTMFRTDNKPFKINTCNFTANNSHQILMQNQKCGLRIGVDGIIRQPKWGHLKDVHKAIKLCEKAMIATDPTITSLGSNIEINSVSMISGFKTESLEEEVGSLNDSGSGWSWISEPIGISKADSFSKFGLLEQINTTADKSDYSWYSLSIDLDAATQIVLHIESLRHALHAFINGKLAGNGTGNHEKAKVKVEIPIILVAGKNKIDLLSLTVGLQNYGAFFDTWGAGITGPVILKGFKNGSTLDLSSQKWTYQVGLKGEDFGLSSGSSGQWNSQSTLPMNQPLIWYKHRLKFEILKYHVPRSWLQPDSNTLVLFEESGGNPKQISFATRQIGSVCSHVSESHPPPVDSWNSDTESGRKVVPVVSLECPYPNQVISSIVFASFGTPLGTCGNFKHGRCSSNINKALSIVQKACIGSSNCRIELSTNAFGDPCKGVTKSLAVEASCA 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0495 740 PANTHER BETA-GALACTOSIDASE RELATED 377 583 IPR001944 GO:0004553|GO:0005975
Aed5g0495 740 PANTHER BETA-GALACTOSIDASE 592 734 - -
Aed5g0495 740 PANTHER BETA-GALACTOSIDASE RELATED 592 734 IPR001944 GO:0004553|GO:0005975
Aed5g0495 740 SUPERFAMILY Galactose-binding domain-like 544 647 IPR008979 -
Aed5g0495 740 Pfam Fasciclin domain 78 212 IPR000782 -
Aed5g0495 740 MobiDBLite consensus disorder prediction 29 65 - -
Aed5g0495 740 Gene3D - 655 740 IPR043159 -
Aed5g0495 740 MobiDBLite consensus disorder prediction 236 251 - -
Aed5g0495 740 Pfam Galactose binding lectin domain 660 739 IPR000922 GO:0030246
Aed5g0495 740 SUPERFAMILY FAS1 domain 45 213 IPR036378 -
Aed5g0495 740 Gene3D - 385 530 - -
Aed5g0495 740 PANTHER BETA-GALACTOSIDASE RELATED 336 377 IPR001944 GO:0004553|GO:0005975
Aed5g0495 740 ProSiteProfiles SUEL-type lectin domain profile. 656 740 IPR000922 GO:0030246
Aed5g0495 740 PANTHER BETA-GALACTOSIDASE 377 583 - -
Aed5g0495 740 PANTHER BETA-GALACTOSIDASE 336 377 - -
Aed5g0495 740 ProSiteProfiles FAS1/BIgH3 domain profile. 66 210 IPR000782 -
Aed5g0495 740 SMART fasc_3 108 213 IPR000782 -
Aed5g0495 740 MobiDBLite consensus disorder prediction 228 254 - -
Aed5g0495 740 MobiDBLite consensus disorder prediction 43 60 - -
Aed5g0495 740 Gene3D FAS1 domain 54 212 IPR036378 -
Aed5g0495 740 SUPERFAMILY Galactose-binding domain-like 405 532 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0495 Aed-Chr5 3620831 3627541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0495 337 582 Glycoside Hydrolase AT2G28470 54.221 1.38e-88 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0495 - - gmx:100793759 453.751