Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0479 ATGGAGTGGGCGAAGACGAAGGAGTGCGCGAGAGAGTTCATGGTTGGGGTGGCGGAGATGACGGTGGAGTTCGGAAAAGGTTGCAGAGACATAGTCAAACAGAGTTTGGTCAACGACGACTCCTACATCGTCAGAAACTTCGGAAGAGACTCCTACATTGGAAAATCAGTGAGAGAACCCTGCGCCAAGCTTTTCGCCAAATTGAGTTTCTTCAACGAGTATTTGCCCGAGGACAAGGACCCTCTCCACGCTTGGTCCGTTATTTTATTCGTTTCCATACTCGCCTTCTTAGGGATTCCTGGAGTAAAAGATTCTCTGCTGGAAGAGTTTGGTATTCGTTTGTTGACGTATGATCTTCCTGGTTTTGGTGAGAGTGATCCTGATCCCAAACGGAATCTGGAATCCTCAGCAACAGATATGGCGTTTTTAGCTGATGTTCTTGGTGTCCACAAGTTTTGGGTTGTTGGTTACTCAAGTGGCAGCATGCATGCTTGGGCTGCTCTTAGATACATTCCTGATAGGCTTGCCGGTGCAGCCATGTTTGCTCCCATGGTGAACCCATATGATCCTATAATGACGAAGGAAGAGAGACGAAGAACTTGGAACAAATGGACACGAAAAAGAAAATTCATGTACTTCTTAGCTCGGAGGTTCCCTAGATTGCTTGCCTTCTTCTACCAGCGAAGCTTCTTGTCAGGAAAGCATGGTCAGATTGATAGGTGGCTGTCATTATCTCTGGGAAACAGGGATAAAGCACTGATGGAAGATCCAATCTATGAGGAATTCTGGCAAAGGGATGTGGAAGAATCAATCAGACAAAGAAATGCAAAACCCTTCATGGAGGAAGCTGCTTTGCAGGTCGCAAATTGGGGTTTCAGCCTTTCAGACCTCAAGTTGCAGAAGAGAAAACAGAGTAGTGATTTGCTCAGTTGGCTTAAGTCAATAATGTTCACTGAAACTGAGGAATATATAGGATTTCTTGGCCCTATACATATATGGCAAGGAATGGATGATAAAGTGGTTCCTCCATCAATGACTGATTTTGTGCACCGCGTACTACCCGGAGCTGCAGTACATAAACTCCCATATGAAGGTCATTTCACCTATATCTACTTTTGCCATGAATGCCACAGACAGATATTTACTACACTTTTTGGAACCCCACAAGGCCCCCTCAGCATTTCTATAGAACTAGATCAAGCTACCCTCGAAGAAACCAATATTGAACAGCAGGAAGTAGTAAACGGCAGTGGTGATTATGCCACAAACTAG 1272 0.4497 MEWAKTKECAREFMVGVAEMTVEFGKGCRDIVKQSLVNDDSYIVRNFGRDSYIGKSVREPCAKLFAKLSFFNEYLPEDKDPLHAWSVILFVSILAFLGIPGVKDSLLEEFGIRLLTYDLPGFGESDPDPKRNLESSATDMAFLADVLGVHKFWVVGYSSGSMHAWAALRYIPDRLAGAAMFAPMVNPYDPIMTKEERRRTWNKWTRKRKFMYFLARRFPRLLAFFYQRSFLSGKHGQIDRWLSLSLGNRDKALMEDPIYEEFWQRDVEESIRQRNAKPFMEEAALQVANWGFSLSDLKLQKRKQSSDLLSWLKSIMFTETEEYIGFLGPIHIWQGMDDKVVPPSMTDFVHRVLPGAAVHKLPYEGHFTYIYFCHECHRQIFTTLFGTPQGPLSISIELDQATLEETNIEQQEVVNGSGDYATN 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0479 423 SUPERFAMILY alpha/beta-Hydrolases 105 370 IPR029058 -
Aed5g0479 423 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 9 95 - -
Aed5g0479 423 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 98 409 - -
Aed5g0479 423 Pfam alpha/beta hydrolase fold 102 370 IPR000073 -
Aed5g0479 423 Gene3D alpha/beta hydrolase 91 375 IPR029058 -
Aed5g0479 423 PANTHER ALPHA/BETA FOLD HYDROLASE 9 95 - -
Aed5g0479 423 PANTHER ALPHA/BETA FOLD HYDROLASE 98 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0479 Aed-Chr5 3490587 3494770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0479 110 190 Acyl Lipid Metabolism Gene Families AT4G02340 32.143 3.41e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0479 - - gmx:100790561 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0479 5 3490587 3494770 Aed5g0479 5 3490587 3494770 ECH