Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0473 GGAAAGAAAGTCTTCGAAAGCAAACTTAAAACAGTTAAACGTACTTTTCCTTTCCTTCCCTATATACTCTGCCCGCAAAACCCAAACACTGTCTCTGTCTCGATGGCGGCGTCGCGAATCGTGGCGCATCCTCCGCCCTATCTCCACCGCCAATCTCCGCCGTCAGACGCCGCGCCGACACTCAACCTCACACTCCTCCCGAAACGGTACCGTAATATCGGCATTCGAGCTTCCCTTCGTGGCCACGAGGAGAAGCAGAAGAACAACGATCTCGCCGATAAATCTCACTCCATCGAACTGCGAACCTCCACCCCCGACGACGTCGTTTCGCGAGATCTTCTGCTCTCTCTTCCGCGTCCTTTGTCTTCGACTCAGTTATCTGCTTCGGTTTCCGATGGTTCTCGCCTTCGTGTTGCATATCAGGGGGTTCATGGTGCTTACAGTGAATCAGCAGCGCAGAAGGCCTACCCAAATTGTGAAGCTGTGCCTTTTACAACCAAACAGCTGGTCCTAGCTTACAATTCAAGCTATCTTATTAGTTCTAAACCTCTCATGAGTCCTTCTTTTGCTGTTGAAAGGTGGCTTGTGGACAGAGCAGTTTTGCCAATTGAGAATTCTTTAGGTGGGAGCATCCACAGAAATTATGACCTTTTACTTCGGCACAGTTTACATATAGTAGGAGAAGTAAATTATGCAGTTCGTCACTGTTTGATGGCCAACCATGGTGTTAAACTTGAGGATTTGAAACGGGTTCTAAGTCATCCACAGGCTCTTGCTCAATGTGAGAACACACTGACAAAATTTGGATTGGTGCGAGAAGCGGTTGATGATACGGCTGGTGCTGCTAAGCATGTTGCTTACCACAAACTACAAGATGCAGGAGCAGTTGCTAGTTCTGCTGCCGCAAAGATCTATGGCTTGAATATACTTGCTCAGGACATTCAGGATGATAGTGATAATGTCACCCGATTTTTAATGTTAGCACGAGAACCTATAATTCCAGGCACTGATAGGCCATTTAAGACTAGCATAGTGTTTTCTTTAGAAGAGGGTCCTGGGATACTTTTCAAAGCCCTTGCTGTTTTTGCTTTGCGTCAGATTAACCTTACAAAGGTTTGTTGTCTTTCTTGGCATCACCTGGTTATATCTTTTGAGGAAATTACAATGCAAGCATGCTTTTAG 1182 0.4619 GKKVFESKLKTVKRTFPFLPYILCPQNPNTVSVSMAASRIVAHPPPYLHRQSPPSDAAPTLNLTLLPKRYRNIGIRASLRGHEEKQKNNDLADKSHSIELRTSTPDDVVSRDLLLSLPRPLSSTQLSASVSDGSRLRVAYQGVHGAYSESAAQKAYPNCEAVPFTTKQLVLAYNSSYLISSKPLMSPSFAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHSLHIVGEVNYAVRHCLMANHGVKLEDLKRVLSHPQALAQCENTLTKFGLVREAVDDTAGAAKHVAYHKLQDAGAVASSAAAKIYGLNILAQDIQDDSDNVTRFLMLAREPIIPGTDRPFKTSIVFSLEEGPGILFKALAVFALRQINLTKVCCLSWHHLVISFEEITMQACF 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0473 393 Pfam Prephenate dehydratase 138 331 IPR001086 GO:0004664|GO:0009094
Aed5g0473 393 ProSiteProfiles Prephenate dehydratase domain profile. 137 329 IPR001086 GO:0004664|GO:0009094
Aed5g0473 393 ProSitePatterns Prephenate dehydratase signature 1. 305 327 IPR018528 GO:0004664|GO:0009094
Aed5g0473 393 PANTHER AROGENATE DEHYDRATASE 66 372 - -
Aed5g0473 393 SUPERFAMILY Periplasmic binding protein-like II 137 335 - -
Aed5g0473 393 SUPERFAMILY ACT-like 324 372 IPR045865 -
Aed5g0473 393 CDD PBP2_Ct-PDT_like 137 331 - -
Aed5g0473 393 Gene3D - 332 376 - -
Aed5g0473 393 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 66 372 - -
Aed5g0473 393 Gene3D - 238 317 - -
Aed5g0473 393 Gene3D - 132 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0473 Aed-Chr5 3434299 3439380 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0473 K05359 - gmx:100787387 529.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0473 5 3434299 3439380 Aed5g0473 5 3434299 3439380 ECH