Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0450 ATGGGAGCTTTAATGTTCCCAACATGCCCGCTATCTCATGGAAGCTCCCTTGGACATTCAGGAGTCACCAATAGAGGAGGTATAAGTGTTGTAGGAAACCCTGGATTTAGTAGTAGCACAAATGGAGTTGGTGGTTCTATTCCTGGGATTCTTCCTACATCTGGTGCAGTTGGTAACAGAAATGCTGTTCCAGGATTGGGAGTAAACCCAATTTTGGGAAATGCAGGTCCTCGAATCACGAGTTCGATGGGAAACATGGTTGGAGGAGGGAATATTGGAAGGACTGGTGGAGGATTGTCTGTGCCTGCTCTTGCATCTCGTCTAAATTTGGGTGCAAACAGTGGATCTGGTGGTTTAGGTATGCAAGGACAGAATCGATTGATGAGTGGTGTTCTTCCACAAGGATCTCCGCAGGTAATTTCAATGCTAGGAAATTCTTATCCTAGTGGGGGTCCACTTTCCCAAAGCCATGTTCAAGCAGTGAGTAACTTAAATTCCATGGGGATGTTGAATGATGTGAATGCCAATGACAGTTCACCTTTTGACATCAATGACTTCCCTCAACTGACAAGCCGTCCTAGTTCTGCAGGAGGGCCTCAAGGACAGTTGGGTTCTTTACGAAAACAGGGTCTTGGTGTTAGTCCCATTGTTCAACAAAACCAAGAGTTTAGCATTCAAAATGAAGATTTCCCAGCTTTACCAGGATTCAAAGGTGGTAATGCAGAGTATGCTATGGATATGCACCAGAAAGAACAACTTCATGACAATGCTGTGCCAATGATGCAATCTCAGCACTTCTCTGTGGGTTATATGGGAAGGTCAGCTGGTTTCAGCTTAGGGGGTACATATTCATCACATCGAGCACAACAGCAACAGCATGCTCCTTCAGTCAGTAGTGGCAATGTCTCTTTTTCATCTGTTAACAACCAGGATCTTCTCCATCTACATGGATCAGATATTTTCCCATCTTCTCATTCGACCTATCATTCACAGACCAGTGGACCTCCTGGCATTGGATTAAGGCCACTAAATTCTCCAAATACAGTTTCTGGTATGGGTTCATATGACCAGCTCATCCAGCAATATCAACAACATCAAAATCAGTCCCAGTTCCGCCTTCAAATGTCAGCTGTAAATCAGTCTTTTAGGGATCAAGGCATGAAGCCTATTCAACCTGCACAACCTGCACCAGATCCATTTGGTTTGCTTGGCCTGTTAAGTGTGATCAGGATGAGTGATCCTGACCTGACGTCTCTTGCTCTTGGAATTGATCTTACTACACTGGGGTTAAATTTGAATTCATCAGAAAATCTTCATAAGACCTTTGGGTCTCCATGGTCTGATGAAGCAGCTAAGGGCGATCCAGAGTTTACTGTGCCACAATGTTATTATGCCAAACAGCCACCTGCTCTACATCTAGGTTATTTTTCAAAGTTTTCGGTGGAAACATTGTTTTACATATTTTACAGCATGCCCAAAGATGAAGCACAATTATTTGCCTCCAGTGAGCTTTACAACAGAGGCTGGTTTTATCACAAAGAACATCGTTTGTGGTTTATAAGAGTTCCCAACATGGAGCCGATGGTTAAAACAAACACATACGAGAGGGGATCTTATCACTGTTTCGAACCAGGCATGTTTGAAACCGTCCGCAAGGATAATTTTGTTCTTCATTATGAAATGTTGGAAAAGAGACCACATCTGCCTCAACTTTGA 1716 0.4341 MGALMFPTCPLSHGSSLGHSGVTNRGGISVVGNPGFSSSTNGVGGSIPGILPTSGAVGNRNAVPGLGVNPILGNAGPRITSSMGNMVGGGNIGRTGGGLSVPALASRLNLGANSGSGGLGMQGQNRLMSGVLPQGSPQVISMLGNSYPSGGPLSQSHVQAVSNLNSMGMLNDVNANDSSPFDINDFPQLTSRPSSAGGPQGQLGSLRKQGLGVSPIVQQNQEFSIQNEDFPALPGFKGGNAEYAMDMHQKEQLHDNAVPMMQSQHFSVGYMGRSAGFSLGGTYSSHRAQQQQHAPSVSSGNVSFSSVNNQDLLHLHGSDIFPSSHSTYHSQTSGPPGIGLRPLNSPNTVSGMGSYDQLIQQYQQHQNQSQFRLQMSAVNQSFRDQGMKPIQPAQPAPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSDEAAKGDPEFTVPQCYYAKQPPALHLGYFSKFSVETLFYIFYSMPKDEAQLFASSELYNRGWFYHKEHRLWFIRVPNMEPMVKTNTYERGSYHCFEPGMFETVRKDNFVLHYEMLEKRPHLPQL 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0450 571 MobiDBLite consensus disorder prediction 171 207 - -
Aed5g0450 571 Pfam NOT2 / NOT3 / NOT5 family 440 562 IPR007282 GO:0006355
Aed5g0450 571 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 11 570 - -
Aed5g0450 571 MobiDBLite consensus disorder prediction 281 302 - -
Aed5g0450 571 Gene3D - 393 571 IPR038635 -
Aed5g0450 571 MobiDBLite consensus disorder prediction 324 352 - -
Aed5g0450 571 MobiDBLite consensus disorder prediction 171 202 - -
Aed5g0450 571 PANTHER CCR4 NOT-RELATED 11 570 IPR040168 GO:0030015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0450 Aed-Chr5 3186425 3196481 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0450 K12605 - gmx:100783662 1036.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0450 5 3186425 3196481 Aed5g0450 5 3186425 3196481 ECH