Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0443 ATGAAAGGAATTGATTTGTTCTGTTCTTCCTCTGCTTCTACAGCAGTATCCACCTCTAACATGCAGCACCATCGTTCTATGGTACATCGAAGCACCAAAAGCTTCGACCATGATTATGAATATGATCGAAGGAAAAGCCAACAACTTCTTCATGTCCCTTGTTCGTCCAAATTGCCCATCAATCCTAAGCCTTACTTCGAGAAACAGAGGAAGAGTTCAGCATCTGATAAGCAAAACTGTGACATGCGTAGAAAAAGCTCTGCTGATGATGGTTCATCCAGAAGATACCTCCTTGGTGACGTGCCACTCATGGAATGGGTATCCGAGTCTAACAAAATCGCAGCAATGGTTCCTTCTCAACATCATGTCAAAGACAAAAGAAACGATCCTCCTACTCTTCGCTCCTCTTCTTCAGCTCGCTCCAAGGACCAGGTTGTGGTTTTGAGGGTGTCATTGCACTGCAAGGCCTGCGCAGGAAAAGTTAGAAAACATGTTTCAAAAATGGAAGGAGTGACATCATTTAGCATAGACATGGAGACAAAGAAAGTGACCATCATCGGAAACGTGACACCACTAGGAGTACTGGCAAGTGTATCAAAGGTGAAGAGTGCACAGCTTTGGCCATCTTCTACATCGCAATCCTCATTAGTCCCTTCATCATCTTCTAGACCAACATCTCCATGGTCAACATAA 693 0.4401 MKGIDLFCSSSASTAVSTSNMQHHRSMVHRSTKSFDHDYEYDRRKSQQLLHVPCSSKLPINPKPYFEKQRKSSASDKQNCDMRRKSSADDGSSRRYLLGDVPLMEWVSESNKIAAMVPSQHHVKDKRNDPPTLRSSSSARSKDQVVVLRVSLHCKACAGKVRKHVSKMEGVTSFSIDMETKKVTIIGNVTPLGVLASVSKVKSAQLWPSSTSQSSLVPSSSSRPTSPWST 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0443 230 SUPERFAMILY HMA, heavy metal-associated domain 144 201 IPR036163 GO:0046872
Aed5g0443 230 MobiDBLite consensus disorder prediction 117 140 - -
Aed5g0443 230 Gene3D - 141 204 - -
Aed5g0443 230 PANTHER OS08G0405700 PROTEIN 1 220 IPR044526 -
Aed5g0443 230 ProSiteProfiles Heavy-metal-associated domain profile. 144 204 IPR006121 GO:0046872
Aed5g0443 230 MobiDBLite consensus disorder prediction 207 230 - -
Aed5g0443 230 MobiDBLite consensus disorder prediction 54 94 - -
Aed5g0443 230 CDD HMA 147 200 IPR006121 GO:0046872
Aed5g0443 230 Pfam Heavy-metal-associated domain 148 193 IPR006121 GO:0046872
Aed5g0443 230 PANTHER HEAVY METAL-ASSOCIATED DOMAIN CONTAINING PROTEIN, EXPRESSED 1 220 - -
Aed5g0443 230 MobiDBLite consensus disorder prediction 69 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0443 Aed-Chr5 3114235 3115218 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0443 - - gmx:100807544 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0443 5 3114235 3115218 Aed5g0443 5 3114235 3115218 ECH