Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0424 ATGTCGGTGATGAGTTCTAGTTCCAGGGGAAGAATAATGACGGAGCTTCAAGTCCCGAAGAAATGGTTGACAGACAGAGAAACAAGTCCTGAGAGAACCAAGGTTTGGGCCGAGCCCAAGCCCAAGCCCAAAACCGCCAGAAAAGTCTCCGTCGTTTACTACCTTTCCCGAAACGGCCAGCTCGAGCACCCTCACTTCATGGAGGTTCCTCTCTCTTCACCTCACGGACTCCACCTCAAAGACGTCATCAACCGCTTGAACGCTCTACGAGGGAAAGGCATGGCCACCTTGTACTCCTGGTCCGCTAAACGGAGCTACAAAACCGGCTTCGTTTGGCACGATTTGTCGGAGAACGATTTCATCTACCCGACGCAAGGGCAAGACTACATTCTCAAAGGATCGGAGATTGTTGAGCACGCTGGCGGAGACGCCGGCGCCGCGAGGGTTAACAAATCGGAGGAGGAATCCGATTCGCCGGTGGTGATCACGCGGCGGCGGAACCAGTCGTGGAGCTCTATCGATATGAACGAGTACCGTGTTTACAAGTCCGAATCGTTCGGTGACTCGGCCGGGAGAATCGCCGCCGACGCGGCGACTCAGACGGAGGAGAAGCGGAGGCGGAGGAGGGCGGTGAGGGAGGAAGAACCGGAGGAGATTCAAGAGAAGAATGATGGAAGAATTGAAGCGGGAATGGAGGGAGAGGGAGAGAGGGTCCCGCACGTGGCTTGTGATGATAGTAATCACACTACGGAGCTGAGTAGGGACGAGATCTCGCCTCCACCGTCAGATTCGAGCCCCGAGACGCTGGAGACGCTGATGAAGGCGGATGGAAGGCTGGGATTGCGGTCTTCGGAATCGGAGAAGAACAATCTGACGGTGGAGAGTTGTCCTAGTGGGAGGATGAGAGCTTCGTCTGTTTTGTTGCAATTGTTATCGTGCGGTGCGGTGTCGTTTAAGGAGTGTGGGGCCAACGCGGTGAAGGATCAAGGGTTCTCGTTGGTTGGGCACTACAAGTCCAGGATGCCCCGCGGAGCAGGGAATCATTCGGGAAAGGAAACGGGGGTATCGATGGAAATTCCGGATTTGAGCAGGGTAAGGCTGGAAGATAAAGAATATTTCAGTGGGAGCTTGATCGAAACCAAGAAAGTGGAAAACCCTGCTTTGAAGAGGTCCTCTTCTTACAATGCAGATAGCGGTTCCCGGATGCAAATAGTGGAGCATGAAGAAGTAGTGCGGGCAAAGTGCATACCGCGGAAGTCTAAGACACTAGCAACAAAAAAAGAAGAGGGAGGAGCTTCCATGCATATTGTTAGCAGTGGCCAACATGGGAGCAAAAGATTCGACCAACAACAATAA 1356 0.5347 MSVMSSSSRGRIMTELQVPKKWLTDRETSPERTKVWAEPKPKPKTARKVSVVYYLSRNGQLEHPHFMEVPLSSPHGLHLKDVINRLNALRGKGMATLYSWSAKRSYKTGFVWHDLSENDFIYPTQGQDYILKGSEIVEHAGGDAGAARVNKSEEESDSPVVITRRRNQSWSSIDMNEYRVYKSESFGDSAGRIAADAATQTEEKRRRRRAVREEEPEEIQEKNDGRIEAGMEGEGERVPHVACDDSNHTTELSRDEISPPPSDSSPETLETLMKADGRLGLRSSESEKNNLTVESCPSGRMRASSVLLQLLSCGAVSFKECGANAVKDQGFSLVGHYKSRMPRGAGNHSGKETGVSMEIPDLSRVRLEDKEYFSGSLIETKKVENPALKRSSSYNADSGSRMQIVEHEEVVRAKCIPRKSKTLATKKEEGGASMHIVSSGQHGSKRFDQQQ 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0424 451 PIRSF UCP031043 14 440 IPR021182 -
Aed5g0424 451 MobiDBLite consensus disorder prediction 253 268 - -
Aed5g0424 451 MobiDBLite consensus disorder prediction 437 451 - -
Aed5g0424 451 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 12 420 IPR010369 -
Aed5g0424 451 MobiDBLite consensus disorder prediction 421 451 - -
Aed5g0424 451 Pfam Protein SOSEKI, plant 49 398 IPR010369 -
Aed5g0424 451 PANTHER OS01G0839200 PROTEIN 12 420 - -
Aed5g0424 451 MobiDBLite consensus disorder prediction 198 252 - -
Aed5g0424 451 MobiDBLite consensus disorder prediction 192 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0424 Aed-Chr5 2998516 3002874 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0424 - - gmx:100779732 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0424 5 2998516 3002874 Aed5g0424 5 2998516 3002874 ECH