Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0418 ATGGCACCTAAGGCAGAGAAGAAGCCAGCGGAGAAGAAGCCTGCAGAGGAGAAGAAGTCGACGGTGGCAGACAAGGCTCCGGCGGAGAAGAAGCCAAAGGCCGGAAAGAAGCTTCCAAAGGAGGGAGGTGCCGGTGGAGAAGGAAAGAAGAAGAAGAGAAACAAGAAGAGCGTGGAGACATACAAGATTTACATCTTCAAGACTGCGGTCAGGCTTGTGCTGCCCGGTGAATTGGCCAAACACGCCGTCTCCGAGGCAGATCTGGAGGTTATGCTATGGTTTGTTGAATATGTACTCCAGGACTTTGTGGATGTTAAGCTTTTGGATGGTGTGGGTGTTGATGCTTGGTACTAG 354 0.5141 MAPKAEKKPAEKKPAEEKKSTVADKAPAEKKPKAGKKLPKEGGAGGEGKKKKRNKKSVETYKIYIFKTAVRLVLPGELAKHAVSEADLEVMLWFVEYVLQDFVDVKLLDGVGVDAWY 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0418 117 Gene3D Histone, subunit A 46 92 IPR009072 GO:0046982
Aed5g0418 117 PANTHER HISTONE H2B.1-RELATED 67 87 - -
Aed5g0418 117 PANTHER HISTONE H2B.1-RELATED 5 67 - -
Aed5g0418 117 PANTHER HISTONE H2B 67 87 IPR000558 GO:0000786|GO:0003677|GO:0030527
Aed5g0418 117 PANTHER HISTONE H2B 5 67 IPR000558 GO:0000786|GO:0003677|GO:0030527
Aed5g0418 117 MobiDBLite consensus disorder prediction 1 55 - -
Aed5g0418 117 SUPERFAMILY Histone-fold 32 90 IPR009072 GO:0046982
Aed5g0418 117 PRINTS Histone H2B signature 80 93 IPR000558 GO:0000786|GO:0003677|GO:0030527
Aed5g0418 117 PRINTS Histone H2B signature 67 80 IPR000558 GO:0000786|GO:0003677|GO:0030527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0418 K11252 - gmx:100820177 64.6994