Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0390 ATGGTCTTGCAGAAGAAGTTAGAGTACGGATTTGATGGCTATCAGGCTCCGGCCATGCCACGAGCTTCCCGATCAACTAGGAGGAGGGCTAAATTTCAAAGAGCAGAAGGCAGTCAAAAGTGTGCATTTGACTTATTGGCCACCGTAGCTGGTGAACTGTTGCAAGAGAGAGAGAATCCAACCACGTTTAGTGATACATCATCAGAAAAGGATCAGGGTGGACTTGTCAAAGAATGCCAAGATGCAAATAAACCATCCAAATCTGAGATTTCTGATGAAGGAAGTTGTGACAAAAGTAGTTTCTCTCGTCTTTCTTCACAAACAAACAATAAAAATTTCTGTTTGAAAGAATTCCCACATCTTTCAGTTGATGGTCATGCAGGGATTGCTTCTACTGTAACAAGTTCTAGTTGCTTAGAGAGGTTCGTTGCAGAGAAATTGGTGGATGGCAGTAACCATTTCAAAGTGGAAAATGTAACTAGCAAAGTTAAATTAGATTCTTCTGATTATCCGAAGGATAGTAATTTCAAGTTAGATGGTGATACAAGTAAAGGAAAGGATGTGCTGCAAAAGTTTGAGAAGGTGCCAATTGGTAGTGGGATTGACATGTGCAGTTTTGAGGATCCTTTGGATGAAAATCCTCCTGCATTGATCAGTTTAGGTGGCAATGCTAAATTGTCTGGGTATAATGATAGGATTCCCAGTAGCTTGTTGTCCAAAAGTCGTGACAATGTACCAGTAGTTAGTAGAGATGATGACGAAAACTCTTCTGGGTGTTCTCACCCTATTATTAATACTAAAACCAAGTCCTTTAGGCCAAAGACTTGTACAGGTGATAATAGAATAAGTAAAAGACTGGCTTCTAACTTTCAGAAACTTGCTGAAAAAACAAAGGATGATACACTTTCTAACAATGATGGAGATTGGAAGCGAACTTACCATAGTAAGAGGAACTGCAATAAACGCCTAAGTTCTCAGATGAATATTCCTTTTAAAAAGAGGAAGCTTTTTAATTATAGCTGTGTGTCAAATTCTAATGGATTTATCAGGAGTGGTGGCATTTATTATTCACCTGAGAATTGTATAAATCAGGATATTTGTGGTTCACCTCCTGGGATGCACAAAGACCCTGGAATATCATCCTTGAAAGCATGTCAACATCAGACGTTACGACGTAGAGGTTCTCATGTGAAGCTTAAGATCAAGTCATTTAAAGTGCCAGAGCTTTTTATAGAGGTTCCAGAAACTGCAACAATTGGGTCCTTGAAGAGGACAGTGATGGATGCAGTGACTGCTGTACTTGGAGGTGAATTGCACATTGGTGTTTTTCTCCAGGGAAAGAAAGTTAGGGATGACAGTAAAACTCTACTTCAAACTGGAATTTCTCATCATAACGAGCTGGATGCTTTGGGTTTTACCCTGGAGCCTAATTCTTCACATAGCCTACCAATTGTATGTGCTGCACATTCTCCCTGTCCTAGCGCTGACATAACTCAGCCTATAATAAGGTATCCTTCCAGTCCAGCTGTAATTCATCAGAGGATTCAAGGCAATTCTGACATGTTACCTGAGCATCAAGTAACCAGTTTAGGTAGCCATTTTGAAAGTGACCATGATTCAGCACCTTCTCCCATTAATGCATCTTTTGATGAATGTATGAAAGATTCCAAAGAACTGGTTACTGTTCCTGAAATGGATGAGGAACTAGCTATGGTACCTTTACACCAGAAGCCAAAGCAATCTGAGGTCGTACAGCGCCGATTACGTAGGCCTTTTTCTGTAGATGAAGTAGAAGCACTGGTTCAAGCAGTTGAAAAACTAGGAACTGGAAGGTGGCGTGATGTTAAGCTCTGTGCTTTTGATAATGCAAAGCATCGAACATATGTGGATTTGAAGGATAAATGGAAAACACTGGTGCACACGGCAAGAATATCCCCTCAGCAAAGGAGGGGTGAACCTGTTCCTCAAGAACTTTTGGACAGGGTTCTAGTGGCCCACGCGTATTGGTCCCAGCAGCAACAGACTAAGCCACAGCACAAGCACCATCCAGAAACTGAATCTGTCTTCTTTAATAATAGTAAGGGCCAGCAGGGGTTGTCAGCAGAAGCAGCAAGTGGCCATGTGGATAATGGGAGTGTTTTGGTTTCTGACTTTTGTTATTAG 2163 0.4115 MVLQKKLEYGFDGYQAPAMPRASRSTRRRAKFQRAEGSQKCAFDLLATVAGELLQERENPTTFSDTSSEKDQGGLVKECQDANKPSKSEISDEGSCDKSSFSRLSSQTNNKNFCLKEFPHLSVDGHAGIASTVTSSSCLERFVAEKLVDGSNHFKVENVTSKVKLDSSDYPKDSNFKLDGDTSKGKDVLQKFEKVPIGSGIDMCSFEDPLDENPPALISLGGNAKLSGYNDRIPSSLLSKSRDNVPVVSRDDDENSSGCSHPIINTKTKSFRPKTCTGDNRISKRLASNFQKLAEKTKDDTLSNNDGDWKRTYHSKRNCNKRLSSQMNIPFKKRKLFNYSCVSNSNGFIRSGGIYYSPENCINQDICGSPPGMHKDPGISSLKACQHQTLRRRGSHVKLKIKSFKVPELFIEVPETATIGSLKRTVMDAVTAVLGGELHIGVFLQGKKVRDDSKTLLQTGISHHNELDALGFTLEPNSSHSLPIVCAAHSPCPSADITQPIIRYPSSPAVIHQRIQGNSDMLPEHQVTSLGSHFESDHDSAPSPINASFDECMKDSKELVTVPEMDEELAMVPLHQKPKQSEVVQRRLRRPFSVDEVEALVQAVEKLGTGRWRDVKLCAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLVAHAYWSQQQQTKPQHKHHPETESVFFNNSKGQQGLSAEAASGHVDNGSVLVSDFCY 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0390 720 Gene3D - 578 681 - -
Aed5g0390 720 MobiDBLite consensus disorder prediction 240 264 - -
Aed5g0390 720 PANTHER TELOMERE REPEAT-BINDING PROTEIN 2-RELATED 1 686 - -
Aed5g0390 720 SUPERFAMILY Homeodomain-like 590 671 IPR009057 -
Aed5g0390 720 CDD SANT_TRF 590 640 - -
Aed5g0390 720 SUPERFAMILY Ubiquitin-like 394 480 IPR029071 -
Aed5g0390 720 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 686 IPR031105 -
Aed5g0390 720 SMART sant 588 641 IPR001005 -
Aed5g0390 720 ProSiteProfiles Myb-like domain profile. 584 639 IPR001005 -
Aed5g0390 720 MobiDBLite consensus disorder prediction 79 96 - -
Aed5g0390 720 MobiDBLite consensus disorder prediction 79 101 - -
Aed5g0390 720 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 585 643 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0390 Aed-Chr5 2782814 2788211 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0390 - - gmx:100797436 1202.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1230 1 11791128 11794190 Aed5g0390 5 2782814 2788211 PCT