Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0373 ATGGCATCAACTACTCTCTTCAACTTTAGGCTCTCTCTGTTCAACCCACTGCACCACCAAAGGAATAAGACGCCAACATCTCTGCTCTCCTCTTCTCGCACCAATCCACGCCTTGTTTCTTCCATTAACGATCATTCGGCTCTCACACGTGTCACATATCCGCTTCTCCAACCTCACTCTGCTCCTAAGCTCAGATTCCACGTTGGAGTACAGAAAGAGTATTCTGATGGGGAAAGCTCCGAGTCGCTTGTTTCTGACGCAACAGGAAAAGAGGATTTTTCATGGTCTTCTGTAATTCTTCCGTTTCTGTTCCCTGCATTGGGTGGCTTATTATTTGGTTATGATATTGGTGCCACCTCTGGCGCTACACTCTCACTGCAGTCACCTGAGCTTAGCGGGATATCATGGTTCAATCTCTCTTCCATTCAGCTTGGACTAGTGGTTAGCAGTTCCCTATATGGGGCTCTTCTTGGCTCGCTTCTTGCATTTGCCATAGCTGATTTCCTTGGGAGGAAGCGACAACTTATTACTGCAGCACTGTTGTATGCGTTTGGTGGCGTGATAACTGCGTATGCACCAGAACTTGGTGTTCTCTTAGCAGGAAGGCTGCTTTATGGACTTGGTATAGGTTTGGCCATGCATGGAGCTCCTTTATATATTGCAGAGACTTGTCCACCACAAATCCGTGGTACTCTAGTATCATTAAAAGAACTCTTCATTGTCCTGGGGATTCTGCTGGGTTATTTTGTGGGAAGCTTTCTGATTGATGCAGTTGGGGGATGGCGGTTCATGTATGGAATTAGTGCTCCAGTCGCTGTACTAATGGGGCTTGGAATGTTGACTCTCCCCAATTCTCCACGGTGGTTGCTTCTCAGAGCAGTGCAGGGAAAAGGTTCTTTTCAAGATTTGAAGGAAGAGGCAATTGTTTCCCAGAGCAAATTAAGGGGCCGGCCGCCTGGTGACAAAGAATCTGAGTGGCAAATAGAAGAGACCCTTCTCTCAATGAATTCTGCCTATGCAGACCAGGAATCAGAGGGGAATTTCTTAGAGGTGTTTCAGGGTCCTAATCTGAAAGCTTTCATAATTGGTGGGGGACTAGTCTTATTTCAACAGATAACAGGTCAACCAAGTGTTCTGTACTATGCAGGCCCGATTCTCCAGAGTGCTGGGTTTTCTGCTGCATCTGATGCTACGAAAGTTTCAGTTGTTATTGGCCTGTTCAAGTTACTGATGACTTGGATTGCTGTACTAAAAGTTGATGATTTGGGGAGAAGACCTCTGCTGATTGGAGGTGTCAGTGGCATTGCCCTTTCTCTAGTTCTCCTTTCTGCTTATTATAAATTTCTTGGAGGTTTCCCACTTGTTGCTGTTGGAGCTTTACTTCTTTATGTTGGTTGTTACCAGATATCATTTGGGCCAATAAGTTGGCTAATGGTATCAGAGATCTTTCCACTTCGCACCAGAGGAAAGGGGATTAGTCTGGCTGTTCTTACCAACTTCGCTTCAAATGCTGTTGTCACCTTTGCATTCTCCCCGCTAAAGGAGCTTCTAGGAGCAGAAAATCTTTTTCTCCTTTTTGGGGCTATTGCTATTCTATCCCTTTTGTTCATTATCTTTTCTGTCCCAGAGACAAAAGGCTTGAGTTTAGAAGATATAGAATCCAAAATCTTGAAGTGA 1677 0.4502 MASTTLFNFRLSLFNPLHHQRNKTPTSLLSSSRTNPRLVSSINDHSALTRVTYPLLQPHSAPKLRFHVGVQKEYSDGESSESLVSDATGKEDFSWSSVILPFLFPALGGLLFGYDIGATSGATLSLQSPELSGISWFNLSSIQLGLVVSSSLYGALLGSLLAFAIADFLGRKRQLITAALLYAFGGVITAYAPELGVLLAGRLLYGLGIGLAMHGAPLYIAETCPPQIRGTLVSLKELFIVLGILLGYFVGSFLIDAVGGWRFMYGISAPVAVLMGLGMLTLPNSPRWLLLRAVQGKGSFQDLKEEAIVSQSKLRGRPPGDKESEWQIEETLLSMNSAYADQESEGNFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAASDATKVSVVIGLFKLLMTWIAVLKVDDLGRRPLLIGGVSGIALSLVLLSAYYKFLGGFPLVAVGALLLYVGCYQISFGPISWLMVSEIFPLRTRGKGISLAVLTNFASNAVVTFAFSPLKELLGAENLFLLFGAIAILSLLFIIFSVPETKGLSLEDIESKILK 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0373 558 PRINTS Sugar transporter signature 480 492 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed5g0373 558 PRINTS Sugar transporter signature 199 218 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed5g0373 558 PRINTS Sugar transporter signature 370 380 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed5g0373 558 PRINTS Sugar transporter signature 457 478 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed5g0373 558 PRINTS Sugar transporter signature 109 119 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed5g0373 558 ProSiteProfiles Major facilitator superfamily (MFS) profile. 101 545 IPR020846 GO:0022857
Aed5g0373 558 Gene3D MFS general substrate transporter like domains 93 556 IPR036259 -
Aed5g0373 558 Pfam Sugar (and other) transporter 104 553 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aed5g0373 558 ProSitePatterns Sugar transport proteins signature 1. 162 179 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aed5g0373 558 CDD MFS_GLUT10_12_Class3_like 104 552 - -
Aed5g0373 558 ProSitePatterns Sugar transport proteins signature 2. 204 229 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aed5g0373 558 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 3, CHLOROPLASTIC 48 558 - -
Aed5g0373 558 SUPERFAMILY MFS general substrate transporter 102 553 IPR036259 -
Aed5g0373 558 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 48 558 - -
Aed5g0373 558 TIGRFAM SP: MFS transporter, sugar porter (SP) family 98 552 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0373 Aed-Chr5 2654690 2658799 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0373 18 558 Organic Solute Cotransporters AT5G59250 73.346 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0373 - - gmx:100809316 957.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0373 5 2654690 2658799 Aed5g0373 5 2654690 2658799 ECH