Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0368 ATGATGCATCAGGCTTCTCTCATAAACCCAACTTGTGATCTTCCATTACTCTCAAACCATAGAAGAAGAAAATCACAGTTCAATCGCATTAGAAGTGAATCCACACAGCACAGGTGGAGTCTTCAGGGCACGACGGCTCTCGTGACTGGTGGCACTCGCGGAATAGGGCACGCCATTGTGGAGGATTTGACGGGGTTTGGAGCCAGAGTGCATACTTGTGCCAGGAATGAACACGATCTCGCTAAGTGCCTTAAGAAATGGAATGATTCCGGTTTCGATGTCACTGGTTCAGTTTGTGATGTCTCTGTTCCACACCAGAGGGAGGCACTCATGGACTCTGTTTCCTCTCTCTTCCACGGCAAACTCAACATCCTTATAAACAATGTAGGGACAAACATCAGGAAACCAGTGACAGACTTTACAAGTGCAGAGTTTTCCACTCTTATTGATACCAATTTGGGATCCGTCTTTCATTTATGCCAACTTGCATATCCACTTTTGAAAGCATCTGGAATGGGAAGTGTTGTGTTTGTCTCATCTGTTTCTGGTTTTGTCTCGCTCAAGTCAATGTCTGTTCAAGGAGCAACGAAAGGGGCAATTAATCAACTGACAAGAAATCTAGCTTGTGAGTGGGCTAAAGACAATATAAGGAGTAATGCAGTGGCACCTTGGTACATCAAAACTTCATTGGTAGAGCAGCATTTTAAAAATGAAAAACTTCTGAATGCATTCATTTCGCGAACTCCCCTTGGAAGGATTGGAGAGGCAGAGGAGGTGTCTTCATTGGTTGCATTCCTTTGCTTACCTGCTGCCTCTTACATTACAGGACAGACCATTTCTGTTGATGGTGGCTTAACAGTCAATGGTCTTTATATAAATTAG 882 0.4388 MMHQASLINPTCDLPLLSNHRRRKSQFNRIRSESTQHRWSLQGTTALVTGGTRGIGHAIVEDLTGFGARVHTCARNEHDLAKCLKKWNDSGFDVTGSVCDVSVPHQREALMDSVSSLFHGKLNILINNVGTNIRKPVTDFTSAEFSTLIDTNLGSVFHLCQLAYPLLKASGMGSVVFVSSVSGFVSLKSMSVQGATKGAINQLTRNLACEWAKDNIRSNAVAPWYIKTSLVEQHFKNEKLLNAFISRTPLGRIGEAEEVSSLVAFLCLPAASYITGQTISVDGGLTVNGLYIN 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0368 293 Pfam Enoyl-(Acyl carrier protein) reductase 52 286 - -
Aed5g0368 293 PRINTS Glucose/ribitol dehydrogenase family signature 214 231 IPR002347 -
Aed5g0368 293 PRINTS Glucose/ribitol dehydrogenase family signature 193 212 IPR002347 -
Aed5g0368 293 PRINTS Glucose/ribitol dehydrogenase family signature 45 62 IPR002347 -
Aed5g0368 293 PRINTS Glucose/ribitol dehydrogenase family signature 249 269 IPR002347 -
Aed5g0368 293 PRINTS Glucose/ribitol dehydrogenase family signature 120 131 IPR002347 -
Aed5g0368 293 PRINTS Glucose/ribitol dehydrogenase family signature 167 183 IPR002347 -
Aed5g0368 293 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 42 288 IPR036291 -
Aed5g0368 293 PANTHER TROPINONE REDUCTASE 21 291 IPR045000 GO:0016491
Aed5g0368 293 Gene3D - 25 291 - -
Aed5g0368 293 PANTHER TROPINONE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC 21 291 - -
Aed5g0368 293 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 193 212 IPR002347 -
Aed5g0368 293 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 173 181 IPR002347 -
Aed5g0368 293 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 120 131 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0368 Aed-Chr5 2616022 2624424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0368 38 290 Miscellaneous Gene Families AT2G29290 63.636 2.40e-118 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0368 K08081 - gmx:100799534 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0368 5 2616022 2624424 Aed5g0368 5 2616022 2624424 ECH