Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0334 ATGTCGGCGTCGACGGGAAACTGCAGCAAAATCCGGCGCATAGTGCGGGTGAGGCAAATGCTTCTCCGATGGCGGAGGAAAGCGGCGGCAGTGGCGGACGTGCCGGCGGGACACGTGGCGGTGTGCGTGGGGCCCAGCAGGAGGAGGTTCATCGTGCGCGCGACGCACCTGAACCACCCGATATTCAAGATGCTTCTGGTGAAAGCCGAAGAGGAGTATGGTTTCTGCAACCACGGTCCTCTCGCTATACCCTGCGACGAGTCTCTCTTCGAAGAACTTCTCAGGGTCCTCACCCGACCCGTATCCGTACCCGGATTCTCCACGCTCGAGGATTTCCAGAGACGCTGCCACGTGGATGTCCCCGCTAGCTTTGACTTTCTAGGAGAATCGCGCCCGTTACTCCGTGACGATCCTATTTGCTAA 423 0.5934 MSASTGNCSKIRRIVRVRQMLLRWRRKAAAVADVPAGHVAVCVGPSRRRFIVRATHLNHPIFKMLLVKAEEEYGFCNHGPLAIPCDESLFEELLRVLTRPVSVPGFSTLEDFQRRCHVDVPASFDFLGESRPLLRDDPIC 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0334 140 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 136 IPR003676 GO:0009733
Aed5g0334 140 Pfam Auxin responsive protein 19 97 IPR003676 GO:0009733
Aed5g0334 140 PANTHER SMALL AUXIN-UP RNA-RELATED 6 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0334 Aed-Chr5 2362345 2362767 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0334 6 134 Calmodulin-binding Proteins AT4G34750 53.147 1.93e-43 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0334 K14488 - gmx:100795345 250.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0334 5 2362345 2362767 Aed5g0334 5 2362345 2362767 ECH