Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0333 ATGGATCAGAGACAGTTCAACCAGATCGAAAACGACGTCGTAAGATTCATGAACTGTGCTGCGGACACACAAACCCTAGAACTTGATGCTCAGATTCAGGTTCTATTTTTTGAGACAAGGTCGTTGATTGATATGACCAATAGCTCATCTTCGAAAAAGTACGGTCAAGATCAGCCTGAATTAAGTGGTCCTACCCCAAATCCCAGCGAACCAAAATGGGCATATCAGAAGACAACGATAAGAAGGTTCTCTGTATTGATTTTACAAAACTTAGGTAAGAAACTCAAAGACGTGGAAATAAGCGTTCCAATAGTGTATGGGAACATAGCATTTTGGCTTGGCAAAAAGGCTAGCGAGTATCAGTCGCATAAATGGACAATATATGTTCGTGGAGCAACCAATGAGGATCTTGGGACGATAATAAAGCGTGCTGTTTTTCAGTTGCATTCTAGTTTCAATAATCCCACACGTGTTGTGGAATCACCGCCTTTTGAATTGTCAGAGTCAGGATGGGGGGAATTTGAAGTTGCCATCACGCTTTATTTCCAGAGTGATGTTTGTGACAGGCCTTTGAACTTATATCATCACTTGAAGTTGTATCCAGAGGATGAAAACAGTTCCATGTCCACAAAGAAACCTGTAGTTGTGGAGTTTTATGATGAGATAGTTTTCCCTGATCCTTCTGAGGCTTTTTTAGCTCGTGTGCAAAATCATCCAGCTGTGAACTTGCCAAGATTACCTGCTGGACTCACCTTGCCTCCTCCCATACCTGTTGAGGATGCAAGTAAAAGGAGGAAAGGTGATACCAAAGATCATTCCTTAAGTCAATGGTTCACTAATTTCTCAGAAGCGGATGAGCTCTTACAGCTTGCAGCAGGTCGTCAGCAGGTTCAAGCTCATATTGCTAAACTCAGACGACAGATAAGCTTGATAGAAGGACAGCATCAGCAGTTCAAATCTTCTTCTGACCAGTAG 975 0.4226 MDQRQFNQIENDVVRFMNCAADTQTLELDAQIQVLFFETRSLIDMTNSSSSKKYGQDQPELSGPTPNPSEPKWAYQKTTIRRFSVLILQNLGKKLKDVEISVPIVYGNIAFWLGKKASEYQSHKWTIYVRGATNEDLGTIIKRAVFQLHSSFNNPTRVVESPPFELSESGWGEFEVAITLYFQSDVCDRPLNLYHHLKLYPEDENSSMSTKKPVVVEFYDEIVFPDPSEAFLARVQNHPAVNLPRLPAGLTLPPPIPVEDASKRRKGDTKDHSLSQWFTNFSEADELLQLAAGRQQVQAHIAKLRRQISLIEGQHQQFKSSSDQ 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0333 324 CDD YEATS_TFIID14_like 100 231 - -
Aed5g0333 324 Gene3D YEATS domain 95 247 IPR038704 -
Aed5g0333 324 MobiDBLite consensus disorder prediction 48 72 - -
Aed5g0333 324 ProSiteProfiles YEATS domain profile. 94 238 IPR005033 GO:0006355
Aed5g0333 324 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 14B 90 322 - -
Aed5g0333 324 Coils Coil 294 314 - -
Aed5g0333 324 Pfam YEATS family 122 201 IPR005033 GO:0006355
Aed5g0333 324 PANTHER YEATS DOMAIN 90 322 IPR005033 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0333 Aed-Chr5 2342759 2345907 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0333 K11341 - gmx:100790602 493.426