Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0332 ATGGAAGTTAACAAGCTCTCTCTCAACCACCACCGCTTCCTCACTCTAACCTCCCGCACTCCCTCCCTCTCAACTCACTTCCTCGGTTCCACTCACACTCTCCGTCCTCCTCCAACGCCACCCTCCCTCCGCTCGAGAAACAAACGCCACAGCAACAACTCAGGTCTCCTCCGCTGGCGCTTCCACTCCCCGCGCTTCGTCTTCAAGGCCTCCTTCCATTCCCACTCCCTCATCGTCATCGTCATCGTCGTTACTCTATCCGCCGTTTCATTCCTCCACTTCACTCTCAACAAGAAAAAAAACAAGTCTCTTAACCAGAGTCGGGGACATGCAAAATTTGCGTTATCACCGCAAAGAACCAATGTTGGGAACAGGGAGATTATTGGTTTTACGGAATTTCAAAGGGACAACACACTCACTGAGATTGGGAAGTTAAAGGAGCATCACCATGGGGAGGACTACCGTGTCTTTGAAGACAACGGGATCCACCTTCCGTATTTGAAATCTTCAGTGGTGCAAGAAGTGGTCGTCGCAGCCGAGACTTCAGAGTCATCTTCTTCTGTTCTTGCCTCTGGTGTCAATAGTAATGGTTCCAAGGTATTGAATGAGTCTTTTTTATCTGTGGCTTTCTCACCAAGTTCATTACAGCCTCTAGAGTTTGCTGAGGAAATGGCTATACAAGTGGAAGAAAGTCAAGATAAAGTTGACTCTGATCACAACTTTCCTTTGAATATGGTCGAATCTGAGCATACTGCTTCTTCTGTTACTGTAAACAATGCACTGACAACAGTCAATGAACCTACTAAAGAAAAAATTGAACTTGGTGCTATAAACGATGATGTCCTTTTCGGTGAATCAGTCAGGGAAGGGCTGTACATGTTTTATGAGGTTAACAAGTCTGCGACCGGATCCATGACACCTCTTAGTAGTTTAAAGTCATTATCTCCCCGTGCTTCTTTTATAAATAAAAACGGATCACCCTCAGTGATGGGAAATGGCGCACTAAAAGGATCAGGGTTATCTACAGATATTCCTCTACAAAGTGAAGAAAATGTCAAAGGAGAAGTTAAAACTTCCAGTCATAAAGAAGGTTACCCTCCACAACATGTGAGTAAAAACTTGAGGAAAGGTGGCATCTCTTTAAGAGAAAGGGAAAGGAATAGTATGGGTCACAAGAGTAACAAAGTTTTGCCCCTGAATGCTTACTCGATCAAGGTGCATGTTGATCAGACAAATGGTCAATTCAGGGTGCATGATGGTCAGAAAATGGATCCTTCAGAGCATCTAAGCAAATATAATAATTTGCTAAATGTTGGGAGGTTACATGAATGTGTAGAATTGCTTAAAGATATGGAAACAAAGGGTTTATTAGACATGACTAAGGTTTATCATGCCAAGTTTTTTAACATCTGCAAGAAACAAAGGGCTGTTAAAGAAGCTTTTGATTTCATTAGGCTCATTCCAAATCCAATTCTGAGTACATTTAATATGCTTATGTCAGTGTGTGCAAGCTCCCAAGATCCAGAAGGGGCTTTCCAAGTTTTGCAACTTCTTAAGGATGCTCGACTAGAACCTGATTGCAAACTTTATACTACTCTGATATTAACTTGTGCTAAGAGTGGGAAAGTTGATCTAATGTTCGAAGTGTTTCACAAGATGGTTAATTCTGGAGTGGAACCTAATATTCATACCTATGGAGCACTTATTGATGGTTGTGCTAGAGCTGGGCAAGTAGCTAAAGCATTTGGTGCTTATGGAATAATGAGGTCAAAGAATGTGAAGCCAGATCGTGTTGTATTCAATGCACTTATAGCTGCTTGTGCCCAATCAGGAGCAGTAGATCGTGCTTTTGATGTGTTAGCAGAAATGGCAGCTGAAACACAGCCCATTGATCCAGACCATGTAACTATAGGAGCATTATTGAAGGCATGCACAAAAGCTGGTCAGGTTGAACGAGCACAAGAAGTGTACAAGATGGTACACAAATATAACATAAAGGGTTGTCCAGAAGTTTACACCATTGCCATTAATTCTTGCAGCCAAACTGGAGATTGGGAATTTGCTCATACTGTCTACAATGACATGACCCAGAAAGGGATCCTCCCGGATGAGATGTTTCTGAGTGCACTAATAGATGTTGCTGGTCATGCTAAAAAGCTGGATGCTGCCTTTGATGTCCTACAGGAAGCCCGTAAAGGAGGAATACATATTGGAATAATGTCATATAGCTCATTGATGGGTGCCTGTAGCAATGCAAGAAATTGGCAGAAAGCATTGGAGCTATATGAATATCTGAAATCTCTTAAATTGATGATAAAAGTTTCAACAGTTAATGCTTTGCTCACTGCACTTTGTGATGGAGATCAATTTCAGAAGGCTTTGGAGGTTTTATTTGAAATGAAAGGATTAGGATTGTGCCCAAACAGTATCACATTCTCAATACTTATAGTGGCAAGTGAGAAAAAGGATGATATGGAGGCAGCTCAAATGCTCCTTTCTCTAGCCAAAAAAGACGGTGTCACCCCTAGTCTCATCATGTGCCGATGCATAATTGGAATGTGCCAGAGGAGATTTGAGAAGGCTTGCTTTGTTGGTGAGCCTGTTTTATCTTTTGACTCAGGACGGCCACAACTTGATAATAAATGGACATCACTGGCCTTAATGTTGTATCGTGAAACAATTGAAGCTGGTGAAAAACCTACAAGTGAAATATTGTCACAAATTCTGGGATGCCTGCAACTCCCTTATGATACATCTGTGAAAAATAGACTTGTTGAGAACCTAGGAGTAAGTGCAGAAACTTCAAGACGTTCAAACCTCTGTTCATTAATGGATGGATTTGGTGAATATGATCCTCGTGCTTTTTCAATACTTGAGGAATCTGCTTCACATGGGGTTGTTCCATCTGTATCATTTAAAGTGAGTCCTATTGTTATTGATGCTAAAGAATTTCATGCTTCTACTGCTGAGGTATACCTCATAACAGTTTTTAAAGGTCTCAAGCATCGACTAGCAGCAGGTGCAAAATTGCCCCATATAATCATTTTATTGCCTGTAGAGAAAACAGAAGTTGTGTCTCCCAAGGGGAAGAAGATTATTAACCTTGCAGGAAGAGCTGGGCAAGCAGTTGGAGCGTTATTGAGGAGGCTTCAGATTCCTCACCAGGGTAGTGAATCGAATGGGAAGCTCAGAATTAATGGTCTGGCTCTGAAAATATGGCTTCAGCCGAAACTTGTATCTCCATTCAGTGTTAATATGGGATCTCCAACATTCAGAGGAAAACCAGGTGATTGGAACTCATCCCTAACCCTATCACAACTGGGCAAAAATATTAGGAATCAGCAACGAAACATCCGAACTGGCAATCTGTCTTTGGACTAA 3381 0.4179 MEVNKLSLNHHRFLTLTSRTPSLSTHFLGSTHTLRPPPTPPSLRSRNKRHSNNSGLLRWRFHSPRFVFKASFHSHSLIVIVIVVTLSAVSFLHFTLNKKKNKSLNQSRGHAKFALSPQRTNVGNREIIGFTEFQRDNTLTEIGKLKEHHHGEDYRVFEDNGIHLPYLKSSVVQEVVVAAETSESSSSVLASGVNSNGSKVLNESFLSVAFSPSSLQPLEFAEEMAIQVEESQDKVDSDHNFPLNMVESEHTASSVTVNNALTTVNEPTKEKIELGAINDDVLFGESVREGLYMFYEVNKSATGSMTPLSSLKSLSPRASFINKNGSPSVMGNGALKGSGLSTDIPLQSEENVKGEVKTSSHKEGYPPQHVSKNLRKGGISLRERERNSMGHKSNKVLPLNAYSIKVHVDQTNGQFRVHDGQKMDPSEHLSKYNNLLNVGRLHECVELLKDMETKGLLDMTKVYHAKFFNICKKQRAVKEAFDFIRLIPNPILSTFNMLMSVCASSQDPEGAFQVLQLLKDARLEPDCKLYTTLILTCAKSGKVDLMFEVFHKMVNSGVEPNIHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALIAACAQSGAVDRAFDVLAEMAAETQPIDPDHVTIGALLKACTKAGQVERAQEVYKMVHKYNIKGCPEVYTIAINSCSQTGDWEFAHTVYNDMTQKGILPDEMFLSALIDVAGHAKKLDAAFDVLQEARKGGIHIGIMSYSSLMGACSNARNWQKALELYEYLKSLKLMIKVSTVNALLTALCDGDQFQKALEVLFEMKGLGLCPNSITFSILIVASEKKDDMEAAQMLLSLAKKDGVTPSLIMCRCIIGMCQRRFEKACFVGEPVLSFDSGRPQLDNKWTSLALMLYRETIEAGEKPTSEILSQILGCLQLPYDTSVKNRLVENLGVSAETSRRSNLCSLMDGFGEYDPRAFSILEESASHGVVPSVSFKVSPIVIDAKEFHASTAEVYLITVFKGLKHRLAAGAKLPHIIILLPVEKTEVVSPKGKKIINLAGRAGQAVGALLRRLQIPHQGSESNGKLRINGLALKIWLQPKLVSPFSVNMGSPTFRGKPGDWNSSLTLSQLGKNIRNQQRNIRTGNLSLD 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0332 1126 MobiDBLite consensus disorder prediction 27 50 - -
Aed5g0332 1126 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 596 630 IPR002885 -
Aed5g0332 1126 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 526 560 IPR002885 -
Aed5g0332 1126 TIGRFAM PPR: pentatricopeptide repeat domain 671 704 IPR002885 -
Aed5g0332 1126 TIGRFAM PPR: pentatricopeptide repeat domain 529 562 IPR002885 -
Aed5g0332 1126 TIGRFAM PPR: pentatricopeptide repeat domain 563 596 IPR002885 -
Aed5g0332 1126 TIGRFAM PPR: pentatricopeptide repeat domain 741 767 IPR002885 -
Aed5g0332 1126 TIGRFAM PPR: pentatricopeptide repeat domain 776 808 IPR002885 -
Aed5g0332 1126 TIGRFAM PPR: pentatricopeptide repeat domain 494 527 IPR002885 -
Aed5g0332 1126 Gene3D Tetratricopeptide repeat domain 456 571 IPR011990 GO:0005515
Aed5g0332 1126 Gene3D Tetratricopeptide repeat domain 739 862 IPR011990 GO:0005515
Aed5g0332 1126 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 738 772 IPR002885 -
Aed5g0332 1126 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 633 667 IPR002885 -
Aed5g0332 1126 Pfam Pentacotripeptide-repeat region of PRORP 494 627 IPR033443 -
Aed5g0332 1126 Pfam Pentacotripeptide-repeat region of PRORP 641 783 IPR033443 -
Aed5g0332 1126 Pfam Pentatricopeptide repeat domain 797 854 IPR002885 -
Aed5g0332 1126 Gene3D Tetratricopeptide repeat domain 572 737 IPR011990 GO:0005515
Aed5g0332 1126 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 668 702 IPR002885 -
Aed5g0332 1126 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 773 807 IPR002885 -
Aed5g0332 1126 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 561 595 IPR002885 -
Aed5g0332 1126 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MRL1, CHLOROPLASTIC 70 1126 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0332 530 854 Glycosyltransferase AT1G05670 23.006 1.33e-25 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0332 - - gmx:100814164 1874.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0332 5 2281062 2291997 Aed5g0332 5 2281062 2291997 ECH