Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0309 ATGGCATCATCTGATAAGGTGGTGGAAACGGTCATAGCGGGGAACTACGTGGAAATGGAAACCGAAGGCAAGCCCAACGATGTCAAAACAAAGCTATCAAACTTCTTGTGGCATGGTGGTTCTGTTTATGATGCTTGGTTTAGCTGCGCTTCCAACCAGGTTGCTCAAGTTCTGCTTACATTGCCATACTCATTCTCCCAGCTGGGAATGCTTTCTGGCATACTTTTCCAACTCTTCTATGGTGTACTGGGAAGTTGGACAGCTTACCTCATTAGCATACTCTACGTTGAATACAGAACAAGAAAAGAGAGAGAAAAACTTAACTTCAGGAACCATGTCATCCAGTGGTTTGAGGTCCTTGATGGACTCCTCGGGAAGCACTGGAGAAACGTGGGTTTGGCCTTTAACTGCACATTTCTTCTGTTTGGATCTGTTATACAACTGATAGCTTGTGCAAGTAACATATATTACATAAATGACAACCTGGACAAGAGGACTTGGACTTACATCTTCGGAGCTTGCTGTGCCACCACTGTCTTTATTCCTTCCTTTCACAACTACAGAATCTGGTCCTTTTTGGGCCTCCTCATGACCACTTACACTGCTTGGTATCTCACTGTTGCCTCTCTCCTTCACGGTCAGACTGAGGGAGTGAAGCATTCGGGTCCGGCCAAAATGGTTCTATATTTTACGGGGGCCACAAACATTCTCTACACATTCGGGGGACATGCTGTTACTGTGGAGATAATGCACGCTATGTGGAAGCCTCAAAAGTTCAAGGCCATATACTTACTGGCAACACTGTATGTGCTGACACTGACACTTCCATCGGCAGCAGCAGTGTATTGGGCATTTGGAGACATGCTTCTAAATCACTCCAATGCTTTTGCTCTCCTTCCTAAATCACCCTTCCGTGACATGGCTTTTATAACATTTGGGTTTGCATGCACCCCACTATACTTCGTGTGGGAGAAAGCAATAGGAATGCACGAGTGCAAGAGCCTATGCAAGCGTGCATTGGTGAGATTACCAGTGGTGATTCCTATATGGTTTTTGGCCATCATATTCCCTTTCTTTGGACCCATCAACTCCACCGTTGGCTCTCTCCTTGTCAGCTTCACCGTTTACATCATCCCTGCCTTAGCTTACATGTTCACCTTTAAATCATCTTCTGCCAGACAGAATGCGGTGGAACAACCTCCCAAGTTTGTTGGAAGATGGGTGGGATCGTACATTATAAACGCATTTGTGGTGGTGTGGGTCCTAGTCGTTGGGTTTGGTTTTGGTGGGTGGGCCAGCATGGTGAACTTCATACGCCAGATTGACACATTTGGACTCTTCACTAAGTGTTATCAATGCCCTCCAGTACCGATTCTACCACCACCTCAGCTCAACGCAACCGCCCCTTCGCCTCTTCACCACCCTCATCACTAG 1434 0.4651 MASSDKVVETVIAGNYVEMETEGKPNDVKTKLSNFLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGVLGSWTAYLISILYVEYRTRKEREKLNFRNHVIQWFEVLDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTVASLLHGQTEGVKHSGPAKMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVLTLTLPSAAAVYWAFGDMLLNHSNAFALLPKSPFRDMAFITFGFACTPLYFVWEKAIGMHECKSLCKRALVRLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAYMFTFKSSSARQNAVEQPPKFVGRWVGSYIINAFVVVWVLVVGFGFGGWASMVNFIRQIDTFGLFTKCYQCPPVPILPPPQLNATAPSPLHHPHH 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0309 477 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 2 3 460 - -
Aed5g0309 477 PANTHER OS05G0424000 PROTEIN-RELATED 3 460 - -
Aed5g0309 477 Pfam Transmembrane amino acid transporter protein 38 422 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0309 Aed-Chr5 2109106 2112505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0309 1 453 Organic Solute Cotransporters AT2G21050 86.334 0.0 844
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0309 K13946 - gmx:100812002 917.916