Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0306 ATGGGTGCCGAGGTTTCCAAACAGGTTGAGAGACGAAAGGCAATCCAAGCAGAGGAAAAAAGTCTCTCTGATCTCAGAAACTCCGGGGAAGGTTACCCTGGCTCAGATTACCATCCCTTAGACAGAAAAAACTGGATGTCGAAGCTGAACCCAGAGAAAGTTGTGATAAAACAAATAGTTTGGCCTGGAACTCATGATTCAGCAACGAACAAGATTGGCATCCCAGGCATCACTCGGCCTTTTGCTCAATGCCAAACCTTATCCATCTACAAGCAGCTTGTGTTGGGGACAAGGGTCATCGACATTCGGGTGCAGGAGGATCGCAAAGTGTGCCACGGAGTCCTCGTTTCATACAGCATGGACGTTGTTATCAAACATGTCAAGAGGTTCTTATCAGAAACCCAATCCGAGATCATCATTCTCGAGGTTAGAACCGAGTTTGGGCACGATGATCCTCCCGAATTCGACAAGTACCTTCAGGAACAACTCGGGGATTACCTAGTTCCCCAGGATGAGAATGTTTTTGATAAGACCATCGCAGAGGTTCTACCAAAGAGAGTAATATGTATTTGGAAGCCGAGAAAATCGCTTCAGGCTCAGGCATGGAGTCCTCGTCCTCTCTGGAGTGCAGGGTATTTGAGGGATAACTGGATCAACACTGATTTGCCATCGACAAAGTTTGAGAGTAACATGAAGCATTTGAGTGAACAGCAACCAGTTACGTCCAGAAAATACTTCTACAGGGTCGAGAACACCGTTACGCCTGTGGCGGATAATCCTGTTCTGTGTGTCAAACCTGTCACTGAGCGCATTCATGGCTTTGCAAGACTCTTCATTAGTCAGTGCTTCTCCAAAGGCTATGCAGATAGACTGCAGATTTTTTCTACGGATTTCATTGACCGGGATTTCGTTGATGCATGCGTTGGACTCACACGTGCCAGGGTTCAGGGTAGAGCCTCACAATTCTAA 969 0.4685 MGAEVSKQVERRKAIQAEEKSLSDLRNSGEGYPGSDYHPLDRKNWMSKLNPEKVVIKQIVWPGTHDSATNKIGIPGITRPFAQCQTLSIYKQLVLGTRVIDIRVQEDRKVCHGVLVSYSMDVVIKHVKRFLSETQSEIIILEVRTEFGHDDPPEFDKYLQEQLGDYLVPQDENVFDKTIAEVLPKRVICIWKPRKSLQAQAWSPRPLWSAGYLRDNWINTDLPSTKFESNMKHLSEQQPVTSRKYFYRVENTVTPVADNPVLCVKPVTERIHGFARLFISQCFSKGYADRLQIFSTDFIDRDFVDACVGLTRARVQGRASQF 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0306 322 Pfam Phosphatidylinositol-specific phospholipase C, X domain 81 174 IPR000909 -
Aed5g0306 322 SMART plcx_3 50 192 IPR000909 -
Aed5g0306 322 Gene3D Phosphatidylinositol (PI) phosphodiesterase 41 311 IPR017946 GO:0006629|GO:0008081
Aed5g0306 322 MobiDBLite consensus disorder prediction 1 25 - -
Aed5g0306 322 PANTHER UNCHARACTERIZED 7 316 - -
Aed5g0306 322 MobiDBLite consensus disorder prediction 1 37 - -
Aed5g0306 322 SUPERFAMILY PLC-like phosphodiesterases 41 310 IPR017946 GO:0006629|GO:0008081
Aed5g0306 322 PANTHER 1-PHOSPHATIDYLINOSITOL PHOSPHODIESTERASE-LIKE PROTEIN 7 316 - -
Aed5g0306 322 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 56 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0306 Aed-Chr5 2086904 2087872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0306 1 319 Acyl Lipid Metabolism Gene Families AT4G38690 70.312 1.10e-174 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0306 - - gmx:100789013 585.489