Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0304 ATGGATTATGAGACTGATGGTTTTGGTGCCAATGGCGAGGGAGAGAGCAAGAGAGTGGGTGAAGGGGTTTTTGAGGAGAGTGTTGCGGTTGCGGGGTCTGATCAAGTTCAGGGTTTAGAAGCAGAGGAGGGTTTTCAGGAGCCAATGGAGCCACGGGAGCAGGTCAATGATCAAGGATCCGAACTCAATTCGGAGGACGCAGTAGTTGATAAACAAGATGATACTGAAACCGGTAGTGCATTGACTTCAGCTTCACCAGATGTCATGCAGGATCCCGATTCCTTAGAGGAGGCTGCTGGGACTGATACTGACTCTGGGAAGGTTGAGGAAGCTGAGGTAATTGCTGAGCAGGATTTGGAGGAAAGGAATGGGCAGGCAAATGATACTGTTCATCTGGATGGTGCTGATTCTGGAGTGCCTGAAGATGGAGAAATTTGTGATGAGTCCCATGGTGTGGGGGATGATAATCTGGAGAGTAGTGATGGGGGTGGTGGAAAGGAAGAATCTGGATTAAATTCTGATAGAGATATGTTAGTTCAGGAGCATGATACTATAGTGGATGGAGATTCTGGTTTGGTGACTGAGAAGGCTGAATTTGATGATTCTGAATTCATGACTCCTAGAGCAAACGGTGGTATAATATTGGACAATGGAACCACAGACAAGGTGGATGGTGTTGCTACTGAGGCTATTATGGAATCTGAATCCAGTGAGGTGATCCCCTCCCAAGATACTGATGCTGGGGATTTGAAGGAGTGTGGCTCAGATCCTGAACTTGGAGATGACAAGATAGAGGTGAAGTTAAATGATTCAGATGATCCTTCTGGTGAGATTCAAGATGATACATCTGAAGAATTACATGGCAATTCAGCTCCAGCTCACATGACTTTAGAACATCAAGATGAAGTAACTAGGGATATGAAGGATGATTCTCTCGGTGCTAATACAAGTCACGAGGATAGAAATGGTGAAGAAATGAGTGCTGATGGCATTCAAAATACTGAAGTAAGAGATTATGGAAATGGTGATGCTGAAGCTGGAAGCTCATTCTTTTTGGAAGATTCATCTACTAATCAGATACTGTCTATTCAGGAGACTGGTGCAGCTGAACCAAAGGAAGCAAGTAATAAGGATGATCAATCTCAGATTTCTGATGAAGAGCATAGAGATCTTGACAACACTTCTGTGGTTGAGGAGCCTAAAAGCACACAGGAGAAGATTATGCAACAGACAGGAACCACTCAAGTGACTGGAGAGCAACATGTTCAACCTGCAGCAGATATTTCTTCTTCATCTGAAAGGTCTGCTGGTACTGTGCCTACTCCTGCCCGTCCTTCATATGAAGATTCTGCTGCTGCTGGGCCCACTCCTGTTCATCCAACAGGCCTTGGTCGTGCAGCTCCATTACTGGAACCTGCATCTCGGGTAGTGCAGCAGCCTCGTGCTAATGGTACTGTATCTAATACTCAGTCCCAGCAAATGGAGGACTCCTCAAGTGGGGAGGCTGAGGAGTATGATGAGACACGTGAGAAACTTCAGATGATCAGGGTGAAGTTTTTACGGTTGGCTCATAGGCTTGGTCAAACTCCCCATAATGTTGTTGTAGCTCAGGTTTTATATAGATTAGGATTGGCTGAGCAACTCAGAGGAAGGAATGGGGGGCGTGTTGGTGCTTTTAGCTTTGATCGTGCAAGTGCAATGGCTGAGCAGCTTGAAGCAGCAGGTCAAGAGCCACTTGATTTCTCTTGTACAATAATGGTCCTTGGAAAGACAGGAGTTGGTAAAAGTGCTACCATCAATTCTATTTTTGATGAGGTTAAGTTTAATACCAGTGCTTTTCATATGGGAACCAAGAAGGTTCAGGATGTTGTGGGAACAGTGCAGGGCATTAAGGTACGGGTCATTGATACGCCAGGACTTCTACCTTCCTGGGCAGACCAGCGAAGCAATGAGAAGATCCTCCACTCTGTTAAGCACTTTATTAAGAAAACTCCACCTGATATTGTGTTGTATCTTGATAGGTTAGATATGCAGAGCAGGGATTTTAGTGATATGCCACTTTTACGCACAATTACTGAAATTTTTGGGCCATCCATTTGGTTCAATGCCATTGTGGTTCTGACTCATGCAGCATCTGCTCCTCCTGAAGGCCCTAATGGTACTGCTTCCAGTTATGACATGTTTGTCACTCAGCGTTCTCATGTTGTGCAGCAGGCCATTCGTCAAGCAGCTGGTGACATGCGTCTCATGAATCCTGTATCCTTGGTGGAGAACCATTCTGCTTGCAGAACAAATAGAGCTGGCCAGAGAGTATTGCCAAATGGCCAGGTTTGGAAACCTCATTTGCTACTTCTATCTTTTGCCTCTAAAATTCTGGCTGAAGCAAATGCTCTCCTCAAGTTACAAGATAGTCCACCTGGGAAGCCATATGTAGCTCGAGCAAGAGCGCCTCCATTACCTTTTCTTCTGTCAACGCTTCTCCAATCAAGACCACAGTTGAAGTTGCCAGAGGAGCAGTTTGGTGATGAGGACAGTCTTGACGATGACCTTGATGAATCATCGGAGTCTGATGATGAAAATGAACACAATGACTTGCCGCCATTTAAACCTTTAACTAAGGCCCAGGTGGAAAAGCTGTCTAAAGCTCATAAGAAAGCTTATTTCGATGAGTTAGAGTATAGAGAAAAGCTTTTGATGAAGAAGCAATTGAAGGAAGAAAAAAAGCGACGGAAAATGATGAAGAAAATGGCAGAATCAGCAAAAGATCTGCCAAGTGACCATGGTGAAAATGTGGAAGAAGAAAGTGGTGGTGCAGCTTCTGTTCCTGTTCCCATGCCGGATTTGGCCCTGCCTGCTTCCTTTGATTCTGATAACCCCACTCACCGGTATCGTTATCTTGATTCATCATCAAATCAGTGGCTTGTAAGACCTGTTCTAGAAACTCATGGATGGGATCATGATGTGGGTTATGAAGGGTTGAATGTAGAAAGATTGTTCGTTCTCAAGGACAAGATTCCTTTATCTTTCACGGGTCAGGCTACTAAAGATAAAAAGGATGCTAATGTTCAGATGGAAATATCCAGTTCAATTAAGCATGGGAAGGGGAAGGCAACTTCATTGGGTTTTGATATGCAAACTGTGGGGAAGGACTTGGCTTATACATTACGCAGTGAGACAAGATTTACTAATTTTAGAAGAAATAACGCAACTGCTGGTCTCTCGTTTACTTTACTTGGTGATGCCTTATCATCTGGATTGAAGATTGAAGACAAATTGGTTGCTAGTAAGCGATTCAAGCTGGTTGTCAGTGGCGGAGCAATGACAGGGCGTGGTGACATTGCTTATGGTGGCAGTTTGGAGGCCCAACTGAGAGACAAGGATTACCCTCTTGGTCGTTTCTTAACCACGCTAGGCCTTTCTGTTATGGATTGGCATGGAGATCTTGCTGTTGGGTGCAATGTGCAATCTCAGATCCCTGTAGGACGACATACAAACCTTGTTGCCCGGGCCAATTTGAACAATCGAGGGGCAGGACAAATAAGTATGCGATTAAATAGTTCAGAACAGCTTCAAATTGCTTTGATTGGTCTCATCCCTCTCATAAAGAAGCTAGTTGGTTATCCTCAACAATTGCAGTTTGGACAATATTGA 3651 0.4448 MDYETDGFGANGEGESKRVGEGVFEESVAVAGSDQVQGLEAEEGFQEPMEPREQVNDQGSELNSEDAVVDKQDDTETGSALTSASPDVMQDPDSLEEAAGTDTDSGKVEEAEVIAEQDLEERNGQANDTVHLDGADSGVPEDGEICDESHGVGDDNLESSDGGGGKEESGLNSDRDMLVQEHDTIVDGDSGLVTEKAEFDDSEFMTPRANGGIILDNGTTDKVDGVATEAIMESESSEVIPSQDTDAGDLKECGSDPELGDDKIEVKLNDSDDPSGEIQDDTSEELHGNSAPAHMTLEHQDEVTRDMKDDSLGANTSHEDRNGEEMSADGIQNTEVRDYGNGDAEAGSSFFLEDSSTNQILSIQETGAAEPKEASNKDDQSQISDEEHRDLDNTSVVEEPKSTQEKIMQQTGTTQVTGEQHVQPAADISSSSERSAGTVPTPARPSYEDSAAAGPTPVHPTGLGRAAPLLEPASRVVQQPRANGTVSNTQSQQMEDSSSGEAEEYDETREKLQMIRVKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGGRVGAFSFDRASAMAEQLEAAGQEPLDFSCTIMVLGKTGVGKSATINSIFDEVKFNTSAFHMGTKKVQDVVGTVQGIKVRVIDTPGLLPSWADQRSNEKILHSVKHFIKKTPPDIVLYLDRLDMQSRDFSDMPLLRTITEIFGPSIWFNAIVVLTHAASAPPEGPNGTASSYDMFVTQRSHVVQQAIRQAAGDMRLMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANALLKLQDSPPGKPYVARARAPPLPFLLSTLLQSRPQLKLPEEQFGDEDSLDDDLDESSESDDENEHNDLPPFKPLTKAQVEKLSKAHKKAYFDELEYREKLLMKKQLKEEKKRRKMMKKMAESAKDLPSDHGENVEEESGGAASVPVPMPDLALPASFDSDNPTHRYRYLDSSSNQWLVRPVLETHGWDHDVGYEGLNVERLFVLKDKIPLSFTGQATKDKKDANVQMEISSSIKHGKGKATSLGFDMQTVGKDLAYTLRSETRFTNFRRNNATAGLSFTLLGDALSSGLKIEDKLVASKRFKLVVSGGAMTGRGDIAYGGSLEAQLRDKDYPLGRFLTTLGLSVMDWHGDLAVGCNVQSQIPVGRHTNLVARANLNNRGAGQISMRLNSSEQLQIALIGLIPLIKKLVGYPQQLQFGQY 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0304 1216 MobiDBLite consensus disorder prediction 135 155 - -
Aed5g0304 1216 MobiDBLite consensus disorder prediction 1 175 - -
Aed5g0304 1216 MobiDBLite consensus disorder prediction 834 871 - -
Aed5g0304 1216 MobiDBLite consensus disorder prediction 298 326 - -
Aed5g0304 1216 MobiDBLite consensus disorder prediction 232 466 - -
Aed5g0304 1216 MobiDBLite consensus disorder prediction 481 507 - -
Aed5g0304 1216 Gene3D - 552 800 IPR027417 -
Aed5g0304 1216 MobiDBLite consensus disorder prediction 249 284 - -
Aed5g0304 1216 ProSiteProfiles AIG1-type G domain profile. 580 809 IPR006703 GO:0005525
Aed5g0304 1216 MobiDBLite consensus disorder prediction 841 859 - -
Aed5g0304 1216 MobiDBLite consensus disorder prediction 911 933 - -
Aed5g0304 1216 MobiDBLite consensus disorder prediction 481 498 - -
Aed5g0304 1216 CDD Toc34_like 555 800 - -
Aed5g0304 1216 Pfam Translocase of chloroplast 159/132, membrane anchor domain 941 1205 IPR024283 -
Aed5g0304 1216 PANTHER TRANSLOCASE OF CHLOROPLAST 120, CHLOROPLASTIC-LIKE 389 1210 - -
Aed5g0304 1216 Pfam AIG1 family 583 716 IPR006703 GO:0005525
Aed5g0304 1216 MobiDBLite consensus disorder prediction 906 941 - -
Aed5g0304 1216 Coils Coil 903 923 - -
Aed5g0304 1216 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 576 717 IPR027417 -
Aed5g0304 1216 MobiDBLite consensus disorder prediction 100 127 - -
Aed5g0304 1216 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 389 1210 IPR045058 -
Aed5g0304 1216 MobiDBLite consensus disorder prediction 75 89 - -
Aed5g0304 1216 MobiDBLite consensus disorder prediction 371 396 - -
Aed5g0304 1216 MobiDBLite consensus disorder prediction 397 439 - -
Aed5g0304 1216 TIGRFAM 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains 460 1207 IPR005690 GO:0003924|GO:0005525|GO:0009707|GO:0045036
Aed5g0304 1216 MobiDBLite consensus disorder prediction 350 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0304 Aed-Chr5 2076468 2080118 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0304 - - gmx:100810931 2095.86