Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0298 TGTTTGGTACATCCACAGAAGCCTCTGTACAATGGAGGAATCATCCAAAACCCAGAACTAAATGATGGACTTCAAGGGTGGACTGCTTTTAGGAACGCAAGAATAGAACATAGAGAATCATTAGGCAACAAATATGTGGCAGCCCATAGTAGAAATCAAGCACATGATAGTGTCTCCCAGAAGATTTATCTTGAAAAGGATAAGCACTATACTTTATCCGCTTGGATACAAGTGAGTGAGAAAAACGCTCCCGTAACAGCAATTGTGAAAACAAGTACAAGATTAAAATTTGCTGGTGCCATTTTTGCCGAGTCTAATTGTTGGTCTATGCTTAAGGGTGGTCTCACAGCAGATGAATCGGGACCCGCAGAGCTCTATTTTGAGGCCAATAATACTTGTGGCGAAATTTGGATAGACAATGTTTCCTTACAACCATTCACAGAGGAGGAATGGAGGTCTCATCAAGATCAAAGCATCGAGAAGGGTCGTAAGAGGAAGGTGTTGGTCCGAGCAGTTGATGAAGAAGGAAATCCATTACGAAATGCAAGTATATCATTGGTACAAAAGGGTTCAGGATTTCCATTTGGGAGTTCCATGAGCAGTGACATCCTAAACAACGAGTTATATCAGAATTGGTTCACCTCTAGATTCACTGTCACCACATTTGGAAATGAAATGAAGTGGTACAGCACAGAAAACGTGCCTGGCAAGGAAGACTACTCGAAAGCCGATGCCATGTTGCAGTTTGCAAAGCAACACAAGATTTCTGTTCGTGGCCACAACATATTTTGGGATGATCCTCAATTCCAACCTAGTTGGGTCCCTTCTCTCTCCTCAACCCAGCTTAACTCTGCAGTGGAAAAGAGGGTGAAATCCGTTGTGTCCAGATATAAGGGCCAACTTATTGCTTGGGATGTTGTCAATGAAAATTTGCACTTCTCATTCTTCGAAGGTAAACTTGGACCAGACTTTTCAGGCAAGATCTTCAACGAGGCTCACAGTATTGATGGACAAACCACTTTGTTCTTGAATGAATATAACACCATTGAGGAAAGTAGAGATAGTGTATCAATCCCCGCAAAGTACATCCAGATGCTTAAAAAAATTCAAAGCTATCCTGGGAATAGTGGATTGCCAATTGGAATTGGGCTCGAGGCCCATTTCCCTGGTAAGTCTATTAACTTTCCTTACTTGAGAGCTTCCATTGATATTCTTGCCGCCACTGGTTTTCCAATTTGGATTACAGAACTAGATGTTGCAAGCCAACCTAACCAGACACATTACTTTGAGCTTGCTCTTAGAGAAACACACGGGCACCCGATGGTTAAGGGTATTGTGATGTGGACAGGCCCTTCGCCACAAGGTTGCTATAGGATTTGTTTGGTAGATAACAATTTCAGGAACTTGCCTGCTGGAGAAGTTGTGGACAGACTCCTTTCTGAATGGAGGTCAGGCAAATTATCAGGTGTCACAGATCAAAATGGATTCTTTGAGACCAATCTTTTCCATGGAGACTATGAAATGACAATCAATCACCCTTCTGTCAATAATTCCACCTTCACACAACACCTACAAGTCACTCCAACAGATCACTCCAGCGAAACAAAACAGATTGTACATCTTTCTATCAACTAA 1635 0.4214 CLVHPQKPLYNGGIIQNPELNDGLQGWTAFRNARIEHRESLGNKYVAAHSRNQAHDSVSQKIYLEKDKHYTLSAWIQVSEKNAPVTAIVKTSTRLKFAGAIFAESNCWSMLKGGLTADESGPAELYFEANNTCGEIWIDNVSLQPFTEEEWRSHQDQSIEKGRKRKVLVRAVDEEGNPLRNASISLVQKGSGFPFGSSMSSDILNNELYQNWFTSRFTVTTFGNEMKWYSTENVPGKEDYSKADAMLQFAKQHKISVRGHNIFWDDPQFQPSWVPSLSSTQLNSAVEKRVKSVVSRYKGQLIAWDVVNENLHFSFFEGKLGPDFSGKIFNEAHSIDGQTTLFLNEYNTIEESRDSVSIPAKYIQMLKKIQSYPGNSGLPIGIGLEAHFPGKSINFPYLRASIDILAATGFPIWITELDVASQPNQTHYFELALRETHGHPMVKGIVMWTGPSPQGCYRICLVDNNFRNLPAGEVVDRLLSEWRSGKLSGVTDQNGFFETNLFHGDYEMTINHPSVNNSTFTQHLQVTPTDHSSETKQIVHLSIN 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0298 544 PANTHER GLYCOSYL HYDROLASE FAMILY 10 PROTEIN 1 536 - -
Aed5g0298 544 PANTHER GLYCOSYL HYDROLASE 1 536 IPR044846 GO:0004553|GO:0005975
Aed5g0298 544 SUPERFAMILY Galactose-binding domain-like 11 144 IPR008979 -
Aed5g0298 544 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 181 478 IPR001000 GO:0004553|GO:0005975
Aed5g0298 544 SUPERFAMILY (Trans)glycosidases 178 485 IPR017853 -
Aed5g0298 544 Gene3D Glycosidases 181 489 - -
Aed5g0298 544 Gene3D - 3 147 - -
Aed5g0298 544 ProSitePatterns Glycosyl hydrolases family 10 (GH10) active site. 409 419 IPR031158 -
Aed5g0298 544 SMART glyco_10 226 479 IPR001000 GO:0004553|GO:0005975
Aed5g0298 544 Pfam Glycosyl hydrolase family 10 189 427 IPR001000 GO:0004553|GO:0005975
Aed5g0298 544 Pfam Carbohydrate binding domain 14 129 IPR003305 GO:0016798
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0298 Aed-Chr5 2057985 2059942 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0298 1 541 Glycoside Hydrolase AT4G33840 56.618 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0298 - - gmx:100775814 945.651