Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0297 ATGAGTCTCGCGCTTCTTGTGTGTTTCATCCTTTTGTCAGGTGTTACATATGTTACTGAAAAATTGATTCTAATCGTGGGTGTTACATGGTTTCAATCTCGTCAGTGTTTGGCACACCCACATAAGCCTTTGTACAATGGAGGAATCATCCAAAACCCAGAACTGAATTATGGACTTCAAGGGTGGATTGCATTTGGGGACGCAAGAATAGAACATAGAGAATCATTAGGCAATAAATATGTGGTAGCCCATAGCAGAAATCAAGCACATGATAGTGTCTCCCAGAAGATTTACCTTGAAAAGGATAAGCACTATACTTTATCTGGTAAATTTTGTACATCTATAGGGTTATTATATTTATTTATTATTCTTCACTCATGGTCATGGGTTGAAATTATATATGCAGCTTGGATACGAGTGAGTGAGGAAAACGTTCCTGTAACAGCAATTGTGAAAACAGCTACAAGATTAAAATTTGCTGGTGCCATTTTTGCTGAGTCTAACTGCTGGTCTATGCTCAAAGGTGGTCTCACAGCAGATGAATCAGGACCAGCTGAACTCTATTTTGAGGGCAATAATACTTGTGCTGAAATTTGGATAGACAACGTTTCCTTACAACCATTCACACAGGAGGAATGGAGGTCTCATCAAGATCAAAGCATCCAGAAGGCTCGTAAGAGGAAGGTGTTAGTCCGAGCGATTGATGAAGAAGGAAATCCTTTACCTAATGCAAGCATATCTATTGTACTTACAAGGGCAGGGTTTCCATTTGGGAGTGCCATAAACAGTTACATCCTGAACAATGGTTTATATCAGAATTGGTTCACCTCTAGATTCACTGTTACCACATTTGAAAATGAAATGAAGTGGTACAGCACAGAAAACGTGCCTGGCAAGGAAGACTACTCGAAAGCCGATGCCATGTTGCAATTTACAAAGCAACACAACATTGGTGTTCGAGGCCACAACATATTTTGGGATGATCCTCATCACCAACCTAGTTGGGTTCCTTCACTCTCCCCATACCAGCTTAACTCAGCTGTGGAAAGAAGGTTGAAATCTGTTGTGTCAAGATATAAGGGCCAACTTATTGCTTGGGATGTTGTCAATGAAAATTTGCACTCCTCATTCTTCGAAGGTAAACTTGGACAAGCTTTTTCAGGAAGAATGTTCAATGAGGCTCATAATATTGATGGACAAACCACTTTGTTCATGAATGAGTATAACACCATCGAGGATAGTAGAGATGGTGTATCAAGCCCAGCAAGGTACATCCAAAAGCTCAAACAGATTCAAAGTTATCCTGGATTTCCAATTGGAATTGGGCTTCAGGCCCATTTCTCTGGCCTGGGTATTAACTTTCCTTATTTGAGAGCCTCCATTGATCATCTTGCTGTCACTCGTTTGCCAATTTGGATTACAGAACTAGATGTTGCAAACCAACCTAGACAGGTAAAGTTCAACAACACCAAATTCTTGTTTTTCATGCAACAATTTGATGAAAATTTTACCCTTTTATTTATGCAGTCACAGTATTTGGAGCTTGCTCTTAGAGAGTTACATGGGCACCCTGTGATAAGGGGTATTGTGATGTGGACAGCATGGTCACCAAAGGGTTGCTATAGGATTTGCTTAGTAGATAACAATTTCAGGAACTTGCCTGCGGGGAATGTCGTGGACAAGCTCCTTTCGGAATGGAGGTTAAGCAAATTTTCAGGAATCACAGATCAAAATGGATTCTTTGAGGCCAATCTTTTCCATGGAGACTATGAAATGACAATCTATCACCCTTTCATGAAGAATTACACCTTCACACAACACCTAAAAGTGACTCCAGCAAATGACTCCAAAGAAACAAAACAATTTGTACAACTTTCTATTAAGTAG 1887 0.3996 MSLALLVCFILLSGVTYVTEKLILIVGVTWFQSRQCLAHPHKPLYNGGIIQNPELNYGLQGWIAFGDARIEHRESLGNKYVVAHSRNQAHDSVSQKIYLEKDKHYTLSGKFCTSIGLLYLFIILHSWSWVEIIYAAWIRVSEENVPVTAIVKTATRLKFAGAIFAESNCWSMLKGGLTADESGPAELYFEGNNTCAEIWIDNVSLQPFTQEEWRSHQDQSIQKARKRKVLVRAIDEEGNPLPNASISIVLTRAGFPFGSAINSYILNNGLYQNWFTSRFTVTTFENEMKWYSTENVPGKEDYSKADAMLQFTKQHNIGVRGHNIFWDDPHHQPSWVPSLSPYQLNSAVERRLKSVVSRYKGQLIAWDVVNENLHSSFFEGKLGQAFSGRMFNEAHNIDGQTTLFMNEYNTIEDSRDGVSSPARYIQKLKQIQSYPGFPIGIGLQAHFSGLGINFPYLRASIDHLAVTRLPIWITELDVANQPRQVKFNNTKFLFFMQQFDENFTLLFMQSQYLELALRELHGHPVIRGIVMWTAWSPKGCYRICLVDNNFRNLPAGNVVDKLLSEWRLSKFSGITDQNGFFEANLFHGDYEMTIYHPFMKNYTFTQHLKVTPANDSKETKQFVQLSIK 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0297 628 Gene3D - 128 206 - -
Aed5g0297 628 SUPERFAMILY (Trans)glycosidases 239 568 IPR017853 -
Aed5g0297 628 PANTHER GLYCOSYL HYDROLASE 32 620 IPR044846 GO:0004553|GO:0005975
Aed5g0297 628 SMART glyco_10 288 563 IPR001000 GO:0004553|GO:0005975
Aed5g0297 628 Gene3D - 38 116 - -
Aed5g0297 628 Pfam Glycosyl hydrolase family 10 252 533 IPR001000 GO:0004553|GO:0005975
Aed5g0297 628 Gene3D Glycosidases 245 573 - -
Aed5g0297 628 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 243 562 IPR001000 GO:0004553|GO:0005975
Aed5g0297 628 PANTHER GLYCOSYL HYDROLASE FAMILY 10 PROTEIN 32 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0297 Aed-Chr5 2053957 2056765 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0297 35 620 Glycoside Hydrolase AT4G33840 51.946 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0297 - - gmx:100775272 977.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0297 5 2053957 2056765 Aed5g0297 5 2053957 2056765 ECH