Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0265 ATGGCGACTCTGCAATTCACCTTCACCGACTCAGCCAGCTTGTTGATGCCTTCTCTACCTTCCACGCGAATGCGAACCTTCTCTCGAAACCGAAGCCTCATTGTCAAAGCAGCCTCTTTTTCTTCTTCTTCTGACGACTTCTCCAGAAGCAGGAGACGCTTCATCGCCGCAACCGCCGTACTCTCGGTCTTGCTCCCTCAGCTATCGGCGCGTGCCGAAGACGCGCTCTCGGAGTGGGAGAGAGTGTACCTCCCTATCGACCCCGGCGTCGTGCTTCTCGACATCGCTTTTGTCCCCGACGACCCCAACCACGGTATCGATGAGGCATGGGCAGCCGGAGGAAGTGGTATTCTCTTGAGAACTACTAATGGTGGCAAGTCATGGATCCGTGACAAAGCTGCCGACATCATTGCTGCAAATTTATACTCAGTGAAGTTCATTGATGAGAAGAAGGGATTTGTATTGGGGAATGATGGAGTCGCTTCGCTACCTTGGATAGAGTTGTAA 507 0.5266 MATLQFTFTDSASLLMPSLPSTRMRTFSRNRSLIVKAASFSSSSDDFSRSRRRFIAATAVLSVLLPQLSARAEDALSEWERVYLPIDPGVVLLDIAFVPDDPNHGIDEAWAAGGSGILLRTTNGGKSWIRDKAADIIAANLYSVKFIDEKKGFVLGNDGVASLPWIEL 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0265 168 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 43 105 - -
Aed5g0265 168 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 107 161 - -
Aed5g0265 168 Pfam Photosynthesis system II assembly factor YCF48 107 160 IPR028203 -
Aed5g0265 168 SUPERFAMILY Oligoxyloglucan reducing end-specific cellobiohydrolase 71 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0265 Aed-Chr5 1808692 1809731 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0265 - - gmx:100810566 160.229