Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0260 ATGGATAGGCTAAGAAGAAATGCAGAGGCGGTGGTGGAGAAGGCGATGAAAGAGAACGATGCTTCCCATGATGCTGCCCATGTTTGGAGAGTTCGTGACCTTGCTCTCTCCCTTGCCAACGAGGAAGGCCTTGCTTCCAATCCCCACTCCTTGCAAATCGTTGAGCTTGCTGCACTGCTCCATGACATAGCTGACTACAAATACCTCAGGGACCCATCTCAGGACAAAATTGTTGAAAATTTTCTTGACCAAGAGGGAGTTGAGGAGGACATGAAATCAAAAATTTTGAAGATCATCAAAGGAATGGGTTTCAAGGAAGAGGTGACAGGAGGTGGAAATAGTGAATGGTTTCCAGAATTTGGAGTTGTGCAAGATGCTGATCGACTTGATGCTATTGGTGCTATAGGAGGCGTTCAAAATCTACTTGAATACTATTGCTCAAATTCTAAAGCGGTGCAGTAA 462 0.4502 MDRLRRNAEAVVEKAMKENDASHDAAHVWRVRDLALSLANEEGLASNPHSLQIVELAALLHDIADYKYLRDPSQDKIVENFLDQEGVEEDMKSKILKIIKGMGFKEEVTGGGNSEWFPEFGVVQDADRLDAIGAIGGVQNLLEYYCSNSKAVQ 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0260 153 Pfam HD domain 26 131 IPR006674 -
Aed5g0260 153 Gene3D - 104 152 - -
Aed5g0260 153 SMART hd_13 20 141 IPR003607 -
Aed5g0260 153 CDD HDc 23 136 IPR003607 -
Aed5g0260 153 Coils Coil 1 21 - -
Aed5g0260 153 SUPERFAMILY HD-domain/PDEase-like 5 138 - -
Aed5g0260 153 PANTHER SUPERFAMILY HYDROLASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G03035)-RELATED 4 150 - -
Aed5g0260 153 Gene3D - 2 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0260 Aed-Chr5 1782995 1784023 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0260 K06950 - gmx:100500273 239.195