Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0222 ATGGCCTCAACTACTCTAACAACCCTCACCCTCCGCACCCTATCTTATCCTACACCCTCCTCTTACCCTACGCACCTCTCCGCCAAACCCTCCATCCAATTCCCCAATCTCTCCCACCGCGTCGCCACCACGCGCCGCGCTCGCGTCGTCGTCTCCGCCGTCGAGGCGCCGGAGAAAATCACGAAGCTCGGCGACGAAATCGCCGGACTCACGCTCGAGGAGGCGAAGAACCTGGTGGACCTCCTCCAGGACAAGCTGGGCGTGTCAGCGGCGGCGTTCGCCCCCGTGGCAGTGGCGGCGGGTGGCGGAGGCGCGGTGGCGGACGTGCCGGCGGTGGTGGAGGAGAAGACGGAGTTCGACGTGTTGATCGAGGAGGTGCCGAGCAACGCTCGAATCTCGGTGATTAAGGCGGTGAGGGCGTTGACGAATCTGGCGCTGAAGGAGGCGAAGGAGTTGATCGAAGGGTTGCCGAAGAAGTTCAAGGAAGGGATTTCGAAGGAAGAAGCTGATGAAGCAAAGAAGCAACTCGAAGAAGCTGGTGCCAAGGTTACCATTGTTTAG 561 0.6096 MASTTLTTLTLRTLSYPTPSSYPTHLSAKPSIQFPNLSHRVATTRRARVVVSAVEAPEKITKLGDEIAGLTLEEAKNLVDLLQDKLGVSAAAFAPVAVAAGGGGAVADVPAVVEEKTEFDVLIEEVPSNARISVIKAVRALTNLALKEAKELIEGLPKKFKEGISKEEADEAKKQLEEAGAKVTIV 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0222 186 CDD Ribosomal_L7_L12 58 185 IPR000206 GO:0003735|GO:0005840|GO:0006412
Aed5g0222 186 Pfam Ribosomal protein L7/L12 dimerisation domain 59 105 IPR008932 GO:0003735|GO:0005840|GO:0006412
Aed5g0222 186 TIGRFAM L12: ribosomal protein bL12 61 185 IPR000206 GO:0003735|GO:0005840|GO:0006412
Aed5g0222 186 Pfam Ribosomal protein L7/L12 C-terminal domain 119 185 IPR013823 GO:0003735|GO:0006412
Aed5g0222 186 SUPERFAMILY ClpS-like 114 185 IPR014719 -
Aed5g0222 186 Gene3D Single helix bin 59 114 IPR036235 GO:0003735|GO:0005840|GO:0006412
Aed5g0222 186 Hamap 50S ribosomal protein L7/L12 [rplL]. 53 186 IPR000206 GO:0003735|GO:0005840|GO:0006412
Aed5g0222 186 PANTHER 39S RIBOSOMAL PROTEIN L12 1 185 IPR000206 GO:0003735|GO:0005840|GO:0006412
Aed5g0222 186 PANTHER 50S RIBOSOMAL PROTEIN L12-1, CHLOROPLASTIC-RELATED 1 185 - -
Aed5g0222 186 Gene3D - 115 185 IPR014719 -
Aed5g0222 186 SUPERFAMILY Ribosomal protein L7/12, oligomerisation (N-terminal) domain 59 121 IPR036235 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0222 K02935 - gmx:100779891 263.077