Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0167 ATGAAGTTCAACCTGGTTCCAATGTTACCTGTGATGACCAACATTCAAAATGCAATTTCATCGGCCAATTTACAAATAAAGGTATCAACAGCAATAGACTCTACTTTGCTTACCAACACCTACCCACCTAATGATGGCGTTTTCACTAATGAGGCACAGTCATATATAAATCCCATAATCAGCTTCCTAGTGAGCAATGGGGCCCCACTTCTTGCCAACATATACCCTTACTTCGCTTATGTTAATAATCAACAAGACATTTCTCTTGACTATGCTCTTTTTAAACAACAAGGAAACAACGATGATGGGTACCAAAACCTTTTTGATGCTATGTTGGATTCACTATACGCTGCTCTTGAGAAAGTTGGAGCCTCTAATTTGCAAGTAGTTGTTTCCGAGAGTGGGTGGCCATCTAGTGGTGGAGATGGAGCCTCAATCGATAATGGAGGCATTTATTATGCTAATTTGATTAGACATGTCTCAGGTGGGACTGGAACTCCAAAGAGACCTGGTGGATCTATAGAGACTTACTTGTTTGCCATGTTTGATGAGAATCAAAAACAAGGTGCAGAAACTGAGCGACATTTTGGTCTATTTCATCCTGATAAATCGGTCAAATACCAACTCAATTTCAATTAA 639 0.3959 MKFNLVPMLPVMTNIQNAISSANLQIKVSTAIDSTLLTNTYPPNDGVFTNEAQSYINPIISFLVSNGAPLLANIYPYFAYVNNQQDISLDYALFKQQGNNDDGYQNLFDAMLDSLYAALEKVGASNLQVVVSESGWPSSGGDGASIDNGGIYYANLIRHVSGGTGTPKRPGGSIETYLFAMFDENQKQGAETERHFGLFHPDKSVKYQLNFN 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0167 212 Pfam Glycosyl hydrolases family 17 8 211 IPR000490 GO:0004553|GO:0005975
Aed5g0167 212 PANTHER GLYCOSIDE HYDROLASE FAMILY 17 PROTEIN 8 209 - -
Aed5g0167 212 Gene3D Glycosidases 4 212 - -
Aed5g0167 212 ProSitePatterns Glycosyl hydrolases family 17 signature. 127 140 IPR000490 GO:0004553|GO:0005975
Aed5g0167 212 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 8 209 IPR044965 GO:0004553|GO:0005975
Aed5g0167 212 SUPERFAMILY (Trans)glycosidases 9 211 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0167 Aed-Chr5 1213031 1213669 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0167 8 211 Glycoside Hydrolase AT4G16260 55.238 1.93e-76 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0167 - - gmx:100775292 347.436