Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0162 ATGGCTTCTAAATCTAGACCCAATCTATCTGAAAATTCCAACAAAGGATCAATGGCAACTCCCAGAGTCAGTAAAGCAAGCAAAGTGGTATCCAAATCAGAATCTGAGTCACCATCACCCTTGCAAAATTCACGACTTTCTGCAGAACGATCACCACGATCTGTGAATTCAAAGCCCGCTGTGGAGCGGAAATCACCAAGACTCTCTGCCACCCCACCTGATAAACAACCCCCTAGAGCTGTGAAGGGTTCCGAGTTGCAGAACCAATTGAACCTTGCTCAAGAAGACCTAAAGAAAGCAAAGGAGCAACTCATTCAGGCCGAGAAGGAGAAGCTAAAAGCAATTGATGACTTGAAAGAAGCACTGAGAGTGGCTGAGGAAGCAAATGAGAAACTCCAGGAAGCAATGGTTGCTCAAAAACGGGCTGAGGAGAATTCTGAGATTGAGAAGTTCCGAGCCGTGGAATTGGAACAGGCTGGAATTGAATCTGTGAAGAAGAAGGAAGAAGAATGGCAGAAAGAGATTGAAAGTGTGAGGAACCAACATGATTTGGACATGGCTGCTCTTCTCTCCACCACTCAGGAGCTTCAGCGGGTTAAACAAGAACTTGCCATGACTTGTGATGCAAAGAACCAGGCATTGAACCATGCTGATGATGCAACTAAAATTGCCGAGATTCATGCAGAGAAAGCAGAGTTTTTATCAGCTGAATTGATGCGATTGAAGGCCTTACTAGATTCAAAACTGGAAACAGAGACCGGTGAAAATGAGGTTATATTGAAACTGAAAACAGAGATAGAAGCTCTCAAGGAAGAACTTGAAAAGGCAAAGCGTTATGATGATAAGTTGTCAGAGAAAGAAACTTCTATTGAACAGCTTAATGTGGAGCTGGAAGCTTCAAAAATGGCTGAATCTTATGCACGTAGTCTGCTAGAGGAGTGGCATAAGAAGGTTGAGGAACTAGAAATGAGGATTGAAGAAGCGAACAAGCTGGAGAGATCTGCATCAGAGTCTTTGGAATCTGTAATGAAACAGCTAGAAGGAAACAATGATTTGTTGCATGAAGCAGAATCTGAGGTTGCTAGTCTTAAAGAGAAGGTGGGATTATTAGAAATGACAATTGGGAGACAGAGAGCAGATGTTGAGGATTCAGAACGCCAACTTCGTATGGCTAAGGAAGAAAGTCTGCAAAAGTCAAAGGAAGTTGAGGCTCTGAAATCTGAACTTGAGAAGGTTAAGGAGGAGAAAGCCCAGGCTTTGAACGATGAAAAGCTTGCTGCATCTAGTGTGCAGGCCTTATTAGAAGAGAAAAACAAACTTATCAGTGAATTGGAGAATTCTAGAGATGAAGAAGAAAAGAGTAAAAAGGCTATGGAAAGCTTAGCTTCTGCATTACATGAAGTATCTGCAGAAGCTAGAGAAGCCAAAGAAAATCTACTAAATATCCAAGCTGAACGTGAAAGCTATGATGCCCAGATTGAAGACTTAAAGTTAGTCTTAAAAGCCACTAATGAAAAATATGAGTCCATGCTTGATGAGGCACGGCATGAGATTGATGTTCTTGTGTGCAGTATTGAGAATTCTAAGAGTGGCTTTGAGAACTCCAAGGCTGAGTGGGAGCAGAGAGAGCTTCAACTAGTCAGCTGCATAAAGAAAAATGAAGAAGAGAAGGTGTCCCTGGAAAAAGAAATAAAAAGATTGCTTTATTTGCTTAAAGAAACTGAGGAAGAAGCTAATGCCAACAGGGAGGAAGAAGCTCAGTTGAAGGAAAATCTGAAGGAAGTTGAGGCTGAGGCAATCCAACTGCAGGAAGATCTTAAGGAAACAACAGCTGAGAACATGAAGTTGAAGGAGAATTTATTGGATAAAGAAAATGAGTTGCAGAGTATGTTTCAAGAAAATGATGAACTCCGAATTAGGGAAGCTGAATCTATCAAGAAGGTGGAGGAGTTGTCTAAGTTGCTGGAAGAAGCTACAACCAGAAACCACACTGAGGAAAATGGGGATCTTACTGACAGTGAGAAGGACTATGATTTGCTTCCTAAAGTAGTCGAATTTTCTGAAGAAAATGGACATGTAGGAGAGGACATTTCAAAGGTAGAGCTTTCAGTGAATCAGGAGGAAGAGCTCAAACAAAACAACAACATACAGGAAGAAAGCATTCTGTCCAACGACAAGGCTGAAAAAATTGAATCTCCCAAACATGAGGAAGTGAGTGAAAAACTGAAGGAAGATGAGAGCAAAGAAAAGGATGATTCAGTAGAAGTTGAATATAAAATGTGGGAGAGCTGCAAGATAGAGAAAAAGGAGTTCTCACCAGAGAGAGAAGCAGAGCCTGAATCATTTGAAGAGGAGGTTGAGTCAAAGATAGAAGAAGGTGGTGAGAGCTTTGATAAGATAAATGGAAATGCTGTAACAGAGAACATTGATGAGAGTGGGAGCCCACCATCAAAACAACAACAGCAACAACAACAATTGAAGAAGAAGAAGAAGCCTTTGCTTGGCAAGTTCGGAAGTCTGCTCAAGAAAAAGGGTTCTAGCAACAACCAGAAATAG 2556 0.4143 MASKSRPNLSENSNKGSMATPRVSKASKVVSKSESESPSPLQNSRLSAERSPRSVNSKPAVERKSPRLSATPPDKQPPRAVKGSELQNQLNLAQEDLKKAKEQLIQAEKEKLKAIDDLKEALRVAEEANEKLQEAMVAQKRAEENSEIEKFRAVELEQAGIESVKKKEEEWQKEIESVRNQHDLDMAALLSTTQELQRVKQELAMTCDAKNQALNHADDATKIAEIHAEKAEFLSAELMRLKALLDSKLETETGENEVILKLKTEIEALKEELEKAKRYDDKLSEKETSIEQLNVELEASKMAESYARSLLEEWHKKVEELEMRIEEANKLERSASESLESVMKQLEGNNDLLHEAESEVASLKEKVGLLEMTIGRQRADVEDSERQLRMAKEESLQKSKEVEALKSELEKVKEEKAQALNDEKLAASSVQALLEEKNKLISELENSRDEEEKSKKAMESLASALHEVSAEAREAKENLLNIQAERESYDAQIEDLKLVLKATNEKYESMLDEARHEIDVLVCSIENSKSGFENSKAEWEQRELQLVSCIKKNEEEKVSLEKEIKRLLYLLKETEEEANANREEEAQLKENLKEVEAEAIQLQEDLKETTAENMKLKENLLDKENELQSMFQENDELRIREAESIKKVEELSKLLEEATTRNHTEENGDLTDSEKDYDLLPKVVEFSEENGHVGEDISKVELSVNQEEELKQNNNIQEESILSNDKAEKIESPKHEEVSEKLKEDESKEKDDSVEVEYKMWESCKIEKKEFSPEREAEPESFEEEVESKIEEGGESFDKINGNAVTENIDESGSPPSKQQQQQQQLKKKKKPLLGKFGSLLKKKGSSNNQK 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0162 851 MobiDBLite consensus disorder prediction 777 791 - -
Aed5g0162 851 Coils Coil 311 422 - -
Aed5g0162 851 MobiDBLite consensus disorder prediction 767 851 - -
Aed5g0162 851 Coils Coil 83 149 - -
Aed5g0162 851 MobiDBLite consensus disorder prediction 657 676 - -
Aed5g0162 851 MobiDBLite consensus disorder prediction 709 755 - -
Aed5g0162 851 Coils Coil 550 640 - -
Aed5g0162 851 Coils Coil 427 517 - -
Aed5g0162 851 MobiDBLite consensus disorder prediction 801 828 - -
Aed5g0162 851 Coils Coil 259 303 - -
Aed5g0162 851 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 11 847 - -
Aed5g0162 851 MobiDBLite consensus disorder prediction 722 755 - -
Aed5g0162 851 MobiDBLite consensus disorder prediction 1 54 - -
Aed5g0162 851 MobiDBLite consensus disorder prediction 1 86 - -
Aed5g0162 851 Coils Coil 161 181 - -
Aed5g0162 851 PANTHER WEB FAMILY PROTEIN-RELATED 11 847 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0162 Aed-Chr5 1174031 1178287 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0162 - - gmx:100777446 1295.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0162 5 1174031 1178287 Aed5g0162 5 1174031 1178287 ECH