Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0159 ATGGAATTAAAAAGAAAAGGGTGGAGGGAGAGGATGTTGCGTGGAATGAGAGATGAGCGGGTGAGGGTGGTTCCGGACCGAGCTAGCCTCGGAGTACCCTATGACACTGGGAGCGGCGACGACGAAGAAGAAGAAGAAGAAGAAGCTCTTAGCCCCTCAGTTTTGCCTGAAAGATGGGATGTATTGGGTCTTGGTCAAGCCATGGTAGACTTCTCTGGCGTGGTTGATGATGATTTCCTGAAGAAATTGGGATTAGAGAAGGGAACACGGAAAGTAGTAAATCACGAGGAAAGAGGAGGAGTTTTGCAGGCTATGGATGGGTGCAGCTATAAAGCTGCGGCTGGTGGATCTCTTTCTAATACCTTAGTGGCTCTCGCAAGGCTTGGAAGTCGCTCCCTAAAACTTCCCGCTATAAATGTCGCAATGACCGGCAGTGTAGGGAATGATCTTTTGGGGGGCTTCTACAGGGAAAAATTACGGCGAGCAAATGTGGAATTTCTTTCGACACCAATCAAGGATGGGACAACTGGCACAGTTATAGTTCTCACAACACCAGATGCCCAGCGCACAATGCTTGCATATCAGGTTCAGTCCACCACAAATGACATCTTTCAAGGCACATCTTCAACTGTTAACTATGACACCTCCTTGTCTAGTGCAGTTTCCAAGACCAACATACTTGTCGTCGAAGGGTATCTATTTGAACTTCCTGATACTATTAAAACAATAACCCAAGCATGTGAGAAAGCGCGGACAAACGGTGCCTTGGTTGCAATAACAGCTTCAGATGTCTCCTGCATTGAGAGACACTTCGATGATTTCTGGTATGATTATTACTCGACTTTGGTGTTAGATCTCACACACATGGATTTTATTGGGAATTCTGTGAATTTAGTCTTTGCAAATGTGGATGAAGCCAGAGCTCTTTGTAATTTTGAAGCAAAGGAAAGTGCTGCTTCAGCTGCAAGGTATCTGAGCCATTTTGTTCCTCTAGTGTCCGTAACAGATGGTCCTAGAGGGTCTTACATAGGTGTAAAAGGAGAAGCTGTATATATCCCTCCTTCTCCATGTGTTCCAGTAGATACTTGTGGTGCTGGGGATGCATATGCTTCTGGCATACTCTATGGTCTTTTAAGAGGCATATCAGATTTGAGAAGTATAGGCACATTAGCAGCTAAGGTTGCTGCCACTGTTGTTGGACAACAGGGAACTCGGCTTAGAATTTCAGATGCAGTCAAATTGGCTGAATCTTTTGAATTTCAACTTGATTCCTCCTCTGTTGGCACTGATCATAATATTTCCAGCGTCTAA 1311 0.4493 MELKRKGWRERMLRGMRDERVRVVPDRASLGVPYDTGSGDDEEEEEEEALSPSVLPERWDVLGLGQAMVDFSGVVDDDFLKKLGLEKGTRKVVNHEERGGVLQAMDGCSYKAAAGGSLSNTLVALARLGSRSLKLPAINVAMTGSVGNDLLGGFYREKLRRANVEFLSTPIKDGTTGTVIVLTTPDAQRTMLAYQVQSTTNDIFQGTSSTVNYDTSLSSAVSKTNILVVEGYLFELPDTIKTITQACEKARTNGALVAITASDVSCIERHFDDFWYDYYSTLVLDLTHMDFIGNSVNLVFANVDEARALCNFEAKESAASAARYLSHFVPLVSVTDGPRGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGLLRGISDLRSIGTLAAKVAATVVGQQGTRLRISDAVKLAESFEFQLDSSSVGTDHNISSV 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0159 436 PANTHER KINASE, PUTATIVE, EXPRESSED-RELATED 41 428 - -
Aed5g0159 436 MobiDBLite consensus disorder prediction 27 51 - -
Aed5g0159 436 Gene3D - 55 413 IPR029056 -
Aed5g0159 436 CDD adenosine_kinase 58 407 - -
Aed5g0159 436 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 361 374 IPR002173 GO:0016773
Aed5g0159 436 Pfam pfkB family carbohydrate kinase 110 406 IPR011611 -
Aed5g0159 436 PANTHER HEXOKINASE FAMILY MEMBER 41 428 - -
Aed5g0159 436 SUPERFAMILY Ribokinase-like 59 406 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0159 Aed-Chr5 1162208 1164655 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0159 - - gmx:100816996 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0159 5 1162208 1164655 Aed5g0159 5 1162208 1164655 ECH