Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0140 ATGGCCACCGTGACGAGGATCCCAACCATCTCTCCAAGGCCAATCCACACGTTTCGCACCCAATCCCCTCTAACCAGAATTCGGGTCGGATCCGGGTCATGTACTCCAATTCGGGCAACGACAGCCAGCACCGAGAGAGTATTGGATTTGGAGCAGAAGAAACTTCAGAACGGAATTGCCAAGTTCTACGATGAGTCGTCTGGCATATGGGAGAACATTTGGGGCGACCACATGCACCACGGCTTTTATGACCTGCATTCCACTGTTTCGCTTTCGGATCATCGCGCTGCTCAGATCCGAATGATCCAAGAGTCTCTTCGCTTTGCCTCTCTTTCTGAGGAGGAGAGTAAGAGTTCTAAATGGCCCAAGAGTATAGTTGATGTTGGGTGTGGCATAGGAGGCAGTTCAAGATACCTGGCCAAGAAATTTGGTGCAAACACCGTAGGCATTACTCTGAGTCCTGTTCAGGCTCAAAGAGCAAATGCTGTTGCTGCTGCTCAAGGATTGGCTGACAAGGTTTCCTTTCAGGTTGCTGACGCTCTGGAGCAGCCATTCCGTAACGGCCAGTTTGATCTGGTGTGGTCCATGGAGAGTGGAGAGCATATGCCTGACAAACCTAAGTTTGTTGGAGAGTTAGCTCGGGTAGCAGCACCTGGTGGCACCATAATAATAGTAACGTGGTGCCACAGGGATCTTGGCCCTGATGAGCAATCCCTACGTCCATGGGAGCTAAATCTCTTGAAGAAGATTTGCGATGCGTATTACCTCCCAGCCTGGTGCTCCACTTCTGATTATGTCAGATTGCTACAATCTCTGTCACTTGAGGATATCAAGTCAGAAGATTGGTCTCGCTTTGTTGCTCCATTTTGGCCAGCGGTGATACGCTCAGCCTTCACATGGAAGGGTCTCACTTCACTCTTGAGTAGTGGACAAAAAACGATAAAAGGAGCTTTGGCTATGCCATTGATGATAGAGGGATACAAGAAGGATCTAATTAAGTTTTCCATCATTACATGTCGAAAACCTGAATAA 1032 0.4855 MATVTRIPTISPRPIHTFRTQSPLTRIRVGSGSCTPIRATTASTERVLDLEQKKLQNGIAKFYDESSGIWENIWGDHMHHGFYDLHSTVSLSDHRAAQIRMIQESLRFASLSEEESKSSKWPKSIVDVGCGIGGSSRYLAKKFGANTVGITLSPVQAQRANAVAAAQGLADKVSFQVADALEQPFRNGQFDLVWSMESGEHMPDKPKFVGELARVAAPGGTIIIVTWCHRDLGPDEQSLRPWELNLLKKICDAYYLPAWCSTSDYVRLLQSLSLEDIKSEDWSRFVAPFWPAVIRSAFTWKGLTSLLSSGQKTIKGALAMPLMIEGYKKDLIKFSIITCRKPE 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0140 343 CDD AdoMet_MTases 125 227 - -
Aed5g0140 343 PANTHER METHYLTRANSFERASE 33 338 - -
Aed5g0140 343 Pfam Methyltransferase domain 126 224 IPR013216 GO:0008168
Aed5g0140 343 ProSiteProfiles SAM-dependent methyltransferase gamma-tocopherol (gTMT)-type family profile. 44 343 IPR025774 GO:0008168|GO:0032259
Aed5g0140 343 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 54 342 IPR029063 -
Aed5g0140 343 Gene3D Vaccinia Virus protein VP39 64 341 IPR029063 -
Aed5g0140 343 PANTHER CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE 33 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0140 Aed-Chr5 1046087 1048771 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0140 123 228 Acyl Lipid Metabolism Gene Families AT1G73600 34.906 3.69e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0140 K05928 - gmx:732543 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0140 5 1046087 1048771 Aed5g0140 5 1046087 1048771 ECH