Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0129 ATGGCGCCCCTCGACAATATCTTCTCCGATTTGAATGAGTCTCTGAACAAGGTTAATCAGAATATTGAAAATGTGTTGCACTCTGCACCAAGCGTGATCAGAGCTGAAGCTGGTCAAGAAGGGGAGAAGAGAGAGACAGAAGATGCTCTGCTTCTCCGCGTGGACATGCCTGGGCTAGCCATGGAGAATGTGAAGATCTCCGTGGAGCACAACACTCTCATGATCAAAGGTGAACGCGACCTCCAAGGGAGTGTTCATCGCTACATCCACAACATTCACCTACAGGCCAATCTTTACAAGATTGACCAGATCATACTTGAGATGAAGAACGGCGTGCTCCAGGTGGTTGTGCCTAAAAAGAAGTAG 366 0.4809 MAPLDNIFSDLNESLNKVNQNIENVLHSAPSVIRAEAGQEGEKRETEDALLLRVDMPGLAMENVKISVEHNTLMIKGERDLQGSVHRYIHNIHLQANLYKIDQIILEMKNGVLQVVVPKKK 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0129 121 CDD ACD_sHsps_p23-like 45 119 - -
Aed5g0129 121 Pfam Hsp20/alpha crystallin family 44 121 IPR002068 -
Aed5g0129 121 Gene3D - 1 121 IPR008978 -
Aed5g0129 121 SUPERFAMILY HSP20-like chaperones 42 120 IPR008978 -
Aed5g0129 121 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 32 121 IPR002068 -
Aed5g0129 121 PANTHER 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 19 121 IPR044656 -
Aed5g0129 121 PANTHER 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 19 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0129 Aed-Chr5 953131 953584 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0129 K13993 - gmx:547852 108.227