Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0118 ATGTTTCTGTTTGGGTCATTTACTGAAGATGAAACCCGAACATTGCTGTCAAAGCAGTCTTCTGGGAAAAAGGAAAAGCCTGTGGAGAAGAATCAGCTGCAATTTGGTTCTCTGAATTCTGTTACTGTTGAGTCAAACAACCTGCTAAATTCATCCAAAGTATCATCAGATAGTGCTCCACCCTCTCGATCCCCGAAATGTAATGGAGTGAAAAGTGTCAGTGATCATTCGCAGCAAGTGACAATTAAAGAGAATGGCAGCATTACCATTATCTCTCCTAGCTCCACCAGTACCATTAGTGTAAATGAAGTTGAAGAAAAAAATGTGAATTCCTTTACATTACTTGGTGAAGATGGTCCCTCAAACAAGTTTACAAAATTGAGCCTAGATGCTTCTAAGGCGGAAAGCACGACGAATGTACATAAAACTGGCAGTGGGGATGGTTCTGCATCAAAGTTATCTGATCCAGAGCCCCAAAAGGCACCTAATGGGCATGCTGTTATGCATGTTAAGGATATACTGCCTCGAGGCCTCATTAACTCTGGGAATCTATGCTTTCTTAATGCAACCATGCAGGCTCTCTTGTCATGTTCACCTTTCGTTCAGCTTTTGCAGCAATTAAAAACTCACAACCTTCCTAAGGTTGGATATCCCACACTGGCGGCATTTTCTGAGTTCATAACCCAATTTGATATGCCAAGCACAACTAAATTAAAGAAGCAAGATACAAATACGTTTGAGTCTGGAAGGCCATTTCGCCCTATTATGTTTGAAGGTGTTCTAAAAAACTTTACTCCGGATGTGCTGAATAGCTTTTCAGGAAGACCAAGACAGGAAGATGCTCAGGAATTTCTGAGCTTTGTAATGGATCAAATGCATGATGAATTACTGAAGCTTGAAGGACAGTCTTCAAGTCTTAATGGTAGCAAATCTTCTCTGGTTTCTTCTGTGGAAGATGATGATGAATGGGAAACAGTGGGGCCAAAGAATAAATCTGCTGTAACAAGGACTCAAAGTTTTCTCCCATCAGAATTAAGTGGTATTTTTGGAGGACAACTTAGAAGTTTGGTGAGCGCTAAAGGAAAGAGATCTTCTGCCACTGTTCAACCATATCTCTTACTCCATCTTGACATCCATCCTGATGCTGTTCACACAATTGAGGATGCACTTCACTTGTTTTCTGCACAAGAAACACTTGAAGGGTACAGAACATCACTCACTGAAAAGGCTGGAGTTGTGACTGCAAAAAAATCTGTAAAAATAGTGACACTTCCTAAAATAATGATATTGCACCTGATGCGCTTTGGTTATGGAAGCCAGGGAAGCACCAAATTGCATAAGCCCGTGCACTTTCCTCTTGAGTTGGTATTGGGTCGTGACTTGCTTGTTTCATCATCTACTGAGGGTCGAAAGTATGAACTTGTTGCTACAATTACTCACCATGGAATGGAGCCTTCAAAGGGGCACTACACAGCTGATGCCCAATATCCCAATGGCCGATGGCTACGATTTGATGATGCATCTGTCTTTGCTATTGGAACAAATAAGGTGCTACATGATCAGGCATATGTCCTCTTCTACAGACAAATGTGA 1593 0.4143 MFLFGSFTEDETRTLLSKQSSGKKEKPVEKNQLQFGSLNSVTVESNNLLNSSKVSSDSAPPSRSPKCNGVKSVSDHSQQVTIKENGSITIISPSSTSTISVNEVEEKNVNSFTLLGEDGPSNKFTKLSLDASKAESTTNVHKTGSGDGSASKLSDPEPQKAPNGHAVMHVKDILPRGLINSGNLCFLNATMQALLSCSPFVQLLQQLKTHNLPKVGYPTLAAFSEFITQFDMPSTTKLKKQDTNTFESGRPFRPIMFEGVLKNFTPDVLNSFSGRPRQEDAQEFLSFVMDQMHDELLKLEGQSSSLNGSKSSLVSSVEDDDEWETVGPKNKSAVTRTQSFLPSELSGIFGGQLRSLVSAKGKRSSATVQPYLLLHLDIHPDAVHTIEDALHLFSAQETLEGYRTSLTEKAGVVTAKKSVKIVTLPKIMILHLMRFGYGSQGSTKLHKPVHFPLELVLGRDLLVSSSTEGRKYELVATITHHGMEPSKGHYTADAQYPNGRWLRFDDASVFAIGTNKVLHDQAYVLFYRQM 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0118 530 MobiDBLite consensus disorder prediction 49 78 - -
Aed5g0118 530 MobiDBLite consensus disorder prediction 132 163 - -
Aed5g0118 530 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 2 530 - -
Aed5g0118 530 Pfam Ubiquitin carboxyl-terminal hydrolase 177 527 IPR001394 GO:0004843|GO:0016579
Aed5g0118 530 Gene3D Cysteine proteinases 164 529 - -
Aed5g0118 530 MobiDBLite consensus disorder prediction 1 33 - -
Aed5g0118 530 MobiDBLite consensus disorder prediction 16 30 - -
Aed5g0118 530 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 2 530 - -
Aed5g0118 530 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 177 192 IPR018200 GO:0004843|GO:0006511
Aed5g0118 530 MobiDBLite consensus disorder prediction 132 152 - -
Aed5g0118 530 SUPERFAMILY Cysteine proteinases 172 528 IPR038765 -
Aed5g0118 530 MobiDBLite consensus disorder prediction 303 328 - -
Aed5g0118 530 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 472 490 IPR018200 GO:0004843|GO:0006511
Aed5g0118 530 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 176 530 IPR028889 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0118 173 530 Miscellaneous Gene Families AT2G24640 29.041 1.24e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0118 K11841 - gmx:100799656 884.404