Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0111 ATGACTCAATCAGATGTTAATGTATCGTCTCAAAATGTTACAAACAACATACGAAGATCTGCAAATTATAAACCCAACATCTGGAAATACGACTTTCTGCAGTCACTTGCCACTAAATATGATAAGGAGGAGTTTGTTATGCAGTTAAACAAGCGGGTGATGGAAGTAAAGGGTGCTTTTGTTGGAGAGGCAAGCGTTTTGCAAAAACTAGAGTTGGTTGATTGGATCCAAAAGTTGGGCCTCGCCAACTACTTTGAAAAGGAAATCAATGAGTTTCTCGAATCTATATTTGCAGTTTGTGTAAAAAACAGCAACGTTAGTGTATCTGCACGATGCTTTAGGCTTCTAAGACAGCATGGATATCCAGTTGTGCCCGATAAACTAAGGAAGTTTTTAGATGAAAAGGGTAAAAGGTCAGATGCTAAAGATGTTGCGGAGCTTCTTGAGGCTACACATTTAGGGTTGGAAGGAGAGAAGATGTTGGATGAGGCCAAAAGCTGTGCCATAAATTATCTGAAGGATGCTACTTTATCTCCCATGGTTCAATATGCCTTGGAGCTTCCATCCCATTGGAGAGTACCGTGGTTTGATGTGAAATGGCACGTGGAGCAATACAATCAGGATAAACACATGGACCCTGCAGAAAGAGAAAGGGGTGATGCTGCTTCGTCAATCCTATGCTATATGAATGAAATGAATGTTTCGGAGGAAAAAGCTAGAAAGCATATCCAAGACATGATAGGCGAAACATGGAAAAAGATAAATGGGCAATATATAACTCCACTCTCCTCTGTATGA 798 0.4035 MTQSDVNVSSQNVTNNIRRSANYKPNIWKYDFLQSLATKYDKEEFVMQLNKRVMEVKGAFVGEASVLQKLELVDWIQKLGLANYFEKEINEFLESIFAVCVKNSNVSVSARCFRLLRQHGYPVVPDKLRKFLDEKGKRSDAKDVAELLEATHLGLEGEKMLDEAKSCAINYLKDATLSPMVQYALELPSHWRVPWFDVKWHVEQYNQDKHMDPAERERGDAASSILCYMNEMNVSEEKARKHIQDMIGETWKKINGQYITPLSSV 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0111 265 PANTHER OS04G0344100 PROTEIN-RELATED 17 211 - -
Aed5g0111 265 PANTHER ALPHA-FARNESENE SYNTHASE 17 211 - -
Aed5g0111 265 PANTHER ALPHA-FARNESENE SYNTHASE 213 260 - -
Aed5g0111 265 Pfam Terpene synthase, N-terminal domain 27 175 IPR001906 GO:0010333|GO:0016829
Aed5g0111 265 Gene3D - 64 211 IPR036965 GO:0010333|GO:0016829
Aed5g0111 265 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 24 210 IPR008930 -
Aed5g0111 265 Pfam Terpene synthase family, metal binding domain 214 253 IPR005630 GO:0000287|GO:0010333|GO:0016829
Aed5g0111 265 Gene3D Farnesyl Diphosphate Synthase 25 63 IPR008949 -
Aed5g0111 265 Gene3D Farnesyl Diphosphate Synthase 213 261 IPR008949 -
Aed5g0111 265 SUPERFAMILY Terpenoid synthases 214 260 IPR008949 -
Aed5g0111 265 PANTHER OS04G0344100 PROTEIN-RELATED 213 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0111 Aed-Chr5 818057 822274 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0111 K14173 - gmx:100812119 289.656