Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aed5g0084 | ATGGCATTTCACGTAGCTTGTCCAATTACATGTCGCCGAATCTGTTTCTGCTCGCTAGGGTTTCCTCGCGCTCTCCACGCTTCTCCCGACGCTGCCAATGGCTTCGTCCACGACGTTTCTGCTCTTCGCGACTTCCTCGCCGACACGCGCAGGGACGACGCCACCGTTCAGGTCTCTGTCCCCAAGGTTGTGCCTCCGCCTCCTCCTCCGCCGCCAACCGACGGTGTTCCTCTCGGCGCTGACGCTCTCGACGAGTCCGCCTCCATGAAGGCCAAGCGCATCGCCCTCCAGCGCAAGGGCGCCGCCGCCATGATCGCCGCCGAGGAGTACGCTCGCCGCTTTGAGTCCGGCGATGTCGTGAATACTCTGGGAAATGTTACTGGAGAGGACCCGGGTCAAGCCAACAGGAGCTATTGTCGAATTTGCAAGTGTGGAGAAAACGAAGGAAGTGAGAAAGCTCATAAGATGCTATCGTGCAAAAGTTGTGGTAAGAAGTATCATAGGAACTGCTTGAGAAATTGGGGTCGAAATAGAGATTTATTTCATTGGAGTTCGTGGACCTGTCCTCTTTGCCGGATTTGTGAGGTTGAGTCTTATGCTTTATTTGCTTCATCCAGGCTTGCAGAAGGACCGGTGATCCAAGTAAGTTCATGTTTTGCAAAAGGTGCGATGGTGCTTACCACTGTTATTGTCTGCAACCGCCACACAAGGTGGTTTATGGCATATACCAACTGCGATGCATGTGGAAGATTGTTTACGAAAGGGAACTACTGTCCTGTTTGTTTGAAGGTTTACAGAGATTCAGAATCAACACCTATGGTTTGTTGTGATACTTGCCAGCTCTGGGTACATTGCCAGTGTGATAATATCAGTGATGAAAAATATCACCAGTTTCAAGTGGATGGGAATTTGCAGTATAAATGTCCTACATGTCGCGGGGAATGTTATCAGGTCAAGAATCCTGAAGATGCTGCCCAAGAGATTTGGAGGAGAAGGAATATTGCCGAGAGTGATTTGATTTCTAACTTGAGGGCTGCAGCTGGTTTGCCAACTCAAGAAGAGATATTTTGTATCTCACCATTTTCAGATGATGAGGATAGTGGGCCTTTAAAATTAAAGAGTGAATCTGCCCGTTCCTTTAAGTTCTCTCTAAAGAATTTGGCCAATGACTCACCAAAGAAGAAATCTTCCAGCAAAAAGACTACTAAGAAAAAAGACTCTCAGTCATTTATGAATAGTAAAATTGACACACACAATAGTTTTGAAGGACATAGTGATATTAAATCTTTGCATAGCTTAGATGATGACAAGAATGATGATATACAATCCCAAAGAAATGAAGGTCCAGATGTTTATTCATCACCTGCTACTGGAAGCTTGAGTCAAACCGAAGCATCTTTTCCTATTAATCAGCCAGGGATTTTGAAACATAAGTTTGTTGATGAGGTGATGGTCAGTGATGAAGAGAGAAAACCTAGAGTTGTTCGAATTAAAAGCAACAAGGCACCTATTCCGGATAGTGAAGAGGAAAGTGGAAAACACAGTCTTAAGACTCAGAATGTGAAAGGGAAGAAGTTGGTTATAAATTTGGGAGCGCGGAAAATTAATGTGGCTAGTTCCCCACGGTCCGATACTTCAAGCTGCCAAAAAGATCAAGATCTGGTGACTGTTAATGGAAATGAAGATATAAGCCAACGGAGGAAGGGAGACAAGTTTGCATTAGATGGGCAAGATGACACAGCTAGGCATATTGATGGTAAAGGAAACAGAGTTGATTCTGGGCAATCAAAAATTTTCAAGGTTTCAGGAAGAGAAAGGAATTTGATTAAGCTGGGAAAAGTTAAGCCAGATGTTTCTGAATTCAACCTGACCCCTGGTAGAGGCAATATGTCTGATGGGCGGATAAACCATAGTGTTGATGGAATGATTAATCAGGTTGGAATAAAAGCCACATCAAGAGGTGACAGGACTTATTTGGGTAAGCAGTCAGAAGGCAGCTCTGATGCGTATGAGACAGATGACAATAATAATCCTACACCTTCACATTCTTTGCCAAAAGATTCCAAACCCTTACTAAGATTTAAATTCAAGAAGCCAAGCATTGAAAGTCAAAATTCTCCTCATCAGGAGGAGAAGACTACAATCAAGGGCCAGAGGTCAAAAAGGAAGAGACCTTCACCTTTTAAGGAGAAAACATCACTTAATGAGTCTGAAGGTGTTAGTCAATCGCATCCAGACAGTGCAATGGATGGGATCATGGATGCAAACTGGATATTGATGAAATTGGGCAATGATGCAATTGGAAAGAGAGTTGAAGTTCATCAGACATCTGACAGTTCTTGGCACAAGGGAGTGGTCACTGATGTAGTTGAAGGCACTTCAAAGTTAAGTGTTGCATTAGACGATGGGAAAGTGAAGACCGTGGAACTCAGGAAACAGGGGGTCCGTTTTGTTCCTCAAAAACAGAAGAGATCAAAGACATGA | 2484 | 0.4416 | MAFHVACPITCRRICFCSLGFPRALHASPDAANGFVHDVSALRDFLADTRRDDATVQVSVPKVVPPPPPPPPTDGVPLGADALDESASMKAKRIALQRKGAAAMIAAEEYARRFESGDVVNTLGNVTGEDPGQANRSYCRICKCGENEGSEKAHKMLSCKSCGKKYHRNCLRNWGRNRDLFHWSSWTCPLCRICEVESYALFASSRLAEGPVIQVSSCFAKGAMVLTTVIVCNRHTRWFMAYTNCDACGRLFTKGNYCPVCLKVYRDSESTPMVCCDTCQLWVHCQCDNISDEKYHQFQVDGNLQYKCPTCRGECYQVKNPEDAAQEIWRRRNIAESDLISNLRAAAGLPTQEEIFCISPFSDDEDSGPLKLKSESARSFKFSLKNLANDSPKKKSSSKKTTKKKDSQSFMNSKIDTHNSFEGHSDIKSLHSLDDDKNDDIQSQRNEGPDVYSSPATGSLSQTEASFPINQPGILKHKFVDEVMVSDEERKPRVVRIKSNKAPIPDSEEESGKHSLKTQNVKGKKLVINLGARKINVASSPRSDTSSCQKDQDLVTVNGNEDISQRRKGDKFALDGQDDTARHIDGKGNRVDSGQSKIFKVSGRERNLIKLGKVKPDVSEFNLTPGRGNMSDGRINHSVDGMINQVGIKATSRGDRTYLGKQSEGSSDAYETDDNNNPTPSHSLPKDSKPLLRFKFKKPSIESQNSPHQEEKTTIKGQRSKRKRPSPFKEKTSLNESEGVSQSHPDSAMDGIMDANWILMKLGNDAIGKRVEVHQTSDSSWHKGVVTDVVEGTSKLSVALDDGKVKTVELRKQGVRFVPQKQKRSKT | 827 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aed5g0084 | 827 | MobiDBLite | consensus disorder prediction | 496 | 518 | - | - | |
| Aed5g0084 | 827 | ProSiteProfiles | Zinc finger RING-type profile. | 139 | 192 | IPR001841 | - | |
| Aed5g0084 | 827 | SMART | ring_2 | 258 | 311 | IPR001841 | - | |
| Aed5g0084 | 827 | SMART | ring_2 | 139 | 191 | IPR001841 | - | |
| Aed5g0084 | 827 | MobiDBLite | consensus disorder prediction | 445 | 468 | - | - | |
| Aed5g0084 | 827 | ProSitePatterns | Zinc finger PHD-type signature. | 139 | 191 | IPR019786 | - | |
| Aed5g0084 | 827 | SUPERFAMILY | FYVE/PHD zinc finger | 255 | 315 | IPR011011 | - | |
| Aed5g0084 | 827 | SMART | PHD_3 | 257 | 312 | IPR001965 | - | |
| Aed5g0084 | 827 | SMART | PHD_3 | 141 | 192 | IPR001965 | - | |
| Aed5g0084 | 827 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 86 | 193 | IPR013083 | - | |
| Aed5g0084 | 827 | MobiDBLite | consensus disorder prediction | 656 | 684 | - | - | |
| Aed5g0084 | 827 | MobiDBLite | consensus disorder prediction | 559 | 594 | - | - | |
| Aed5g0084 | 827 | PANTHER | PHD FINGER FAMILY PROTEIN | 236 | 821 | - | - | |
| Aed5g0084 | 827 | PANTHER | PHD FINGER FAMILY PROTEIN | 2 | 196 | - | - | |
| Aed5g0084 | 827 | ProSitePatterns | RecR protein signature. | 245 | 267 | IPR015967 | GO:0006281|GO:0006310|GO:0046872 | |
| Aed5g0084 | 827 | CDD | RING-H2 | 139 | 192 | - | - | |
| Aed5g0084 | 827 | SUPERFAMILY | FYVE/PHD zinc finger | 130 | 193 | IPR011011 | - | |
| Aed5g0084 | 827 | MobiDBLite | consensus disorder prediction | 388 | 468 | - | - | |
| Aed5g0084 | 827 | PANTHER | HISTONE ACETYLTRANSFERASE | 236 | 821 | - | - | |
| Aed5g0084 | 827 | PANTHER | HISTONE ACETYLTRANSFERASE | 2 | 196 | - | - | |
| Aed5g0084 | 827 | MobiDBLite | consensus disorder prediction | 419 | 444 | - | - | |
| Aed5g0084 | 827 | MobiDBLite | consensus disorder prediction | 563 | 590 | - | - | |
| Aed5g0084 | 827 | MobiDBLite | consensus disorder prediction | 653 | 748 | - | - | |
| Aed5g0084 | 827 | MobiDBLite | consensus disorder prediction | 496 | 517 | - | - | |
| Aed5g0084 | 827 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 252 | 314 | IPR013083 | - | |
| Aed5g0084 | 827 | ProSiteProfiles | Zinc finger PHD-type profile. | 136 | 194 | IPR019787 | - | |
| Aed5g0084 | 827 | MobiDBLite | consensus disorder prediction | 392 | 411 | - | - | |
| Aed5g0084 | 827 | ProSiteProfiles | Zinc finger PHD-type profile. | 255 | 314 | IPR019787 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aed5g0084 | - | - | gmx:100815407 | 1433.7 |