Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0083 ATGGGATTTGATAATGAGTGCATAGTGAACATTCAATCTCTTGCTGGAGAGTACTTCTGTCCTGTCTGTCGTCTGCTTGTATTTCCAAATGAAGCTTCGCAGTCACAATGCACCCATTTATATTGCAAGCCATGTTTGACTTACGTTGTGAGCACTACAAGGGCTTGCCCATATGATGGTTACTTGGTCACCGAGGCAGATTCCAAGCCTCTGACAGAGTCAAATAAGGCACTTGCTGAAACTATTGGAAAAATAGCAGTTCATTGCCTTTATCATAGGAGCGGATGCACATGGCAAGGAACTTTGTCTGAGTGCACATCTCATTGTTCTGGATGTGCTTTTGGCAATTCTCCTGTTGTTTGCAACAGGTGTGGGATCCAAATAGTGCATCGCCAAGTACAAGAGCATGCACAAAATTGCCCCGGTGTGCAAAGCCAGGTACAGCAGGTAGCCACTACCCAGGATCCTTCAGCTACTGCTGCTGTCGCTTCTACAGATCATAATCAGAATGCTCCTCCAGTTGCAGCAACAGCTTCACAAGCTCCTACATCTCAAACTGCTGTCACAACTACTATGCCTGGGCAGGTTTCAAATCAGCTAACCAATCCAGCTTCCCAAACCCAAGCTTTAGTTCAAACTGCTGGGCAGCCAACAGCAGAGCAATGGTATCAGCAGCAACAATATCAACAATATTACCAGCAATACCCTGGACAAGATCCATACCAACAGCAGTATCAACAATACTACCCCTATCAACAGTCTGCTGTTCCACAGTACCAGCAGGCTTATGGTCAGCTCCAGCCTCAGTCTCAATCACAGCCCCAGCCACAGGCCCAACACCAATCTCAGCCTCAACTTCAACCACAACCTCAGGTACAAGGACTGTCTCATCCACCTACACATATTCAGGCTTCCTTGGCCCCACCATCTCAGAATCAGATGCAAGTTCAACAACCACCACAGCAACTTCAACCTGCTGTGCAGCCACATGGTCCGACAAGTCATGCACCAGGCCATGGTCAAACCCTCTCCCAGTCTCAAACTCAGCCATATCCTTACCCCCAAGTTCAGTCTCATTCTGTCCAACCTCAATCCCAACAACCTATGCAAATGCCTCCTTATCAGCAGCCTCATCCTCAAATGCAGCATTCACAACCAGTTCAGAAGTATCACGTTCCTCAATCTCAAGTTCATGTTCAATTGCAACCTAATGCTCCAATTCAACATCACTCTCAACTCCCCATGCCTCCTCACCAGCCTGTTACTCCTAATGTCCAGCTTCAAGTGCAAAATGCAACATCACATTCAGTGTCTGGGCATCACTCTTATCCCCAACCTCCACCTCACCCAAATATGCAACCAGGAGTCCCTCAACATACTATGCACATGCATCCTCAAAGTGGGCCTCAACCCCATGCCCAACACCCTGTCCAGATGCAGAATCAGTTTCCTCCACAAATTCCAACGGCACGTCCTAATCAATCTCATGCTATGTTTCCTAACCAGCAACAGCCAGCTTTGTTGCCTTCATCAGTTCAGGGCCAAACTACCCCTCCTTTGCAACAGCAGCCAGTATATGCCCATAATCAGCAACCTGGGCAAATCAACCAACATCCTACTTTGCCACCTATTCAGCAAATACCTCAGCAGCCGTTTGCACAACACCAAATGCCCATGCCATCTCATTTACGACCACAAGGTCCAGCTCATTCATTTCCAAAGCATGCATATCCACAGTCACAGGGTAATACTGCACTATCAAATAGCGTTCAGCACAGTCAATCTCAGAATGCTGCAGGAAGGCCTTTAGTTCCTAATCATGCAGGACACCTACAGCCATTTTCACAATCTGCCAATACCATTCCAGTTAGATCTGGGCAAAATGGTGCTGGCTACCTGCCTGAAAATCAGAAATTGTTGGTTGGGACCAACAATCAAGTACAGTTGCCTTCTGAATTGCAGTCTAGGGCACCAGAGTCAATTGAAAGACAAGGTGATGTCGTCGAACAACAAACTGCCTCTGCCTCTGGGAAACTAGGTAAAGTTTATAAAGATTTGGACAGTGTGTCTGGATCAGCAAATGAGTCAAAAACTGAAAAAGTTGAAGCAGATTTGAAGCCAATAGAGGTTGGAAATAAGCAAAGTAGTGAAGATCCTCACTCTCTGAAGACTTCAGTCCCAAATGCCAATGCAGGAGAAAATGGTGATTCTGTGAATAAGAATCATGGGATGGGGGAGGCTGCTGAAAGCAATTGGAAGCCTTCAAGTGGCAATAAATCAGGTGGTGCAATGCATGGGGTTCAAAATGATAGCAATGAGCATTCTGTCCAAGGCAATGAATTTCAAGATGGACATACACTGAAGACAGAGACAAAGCTCCCTGAGTCAGAAACTGATAAATTGCATAATGATGACAATCCTGAATCATCTGTCTCTCAAAGCAATGGGGGTTTTGCTCCACTTTCTCACCCAGCTACTTTCACTGATCAGAGTAAGCATCAACAACCAATGATTAATTATGGGCCTCCTTCTGTCCAGCAGAGATCTTCTGCAATGTTAGCATCACAATTGCCACATCCAACAGTTCCGAATCAGCCACTCTCTTCAGTGCACCCTTCAACCCTTATTAGGAATCATGGAGCTGCCCATGCTCCTCATTCAGGACAGCCCTTAACAGAGAATTTTCCGCCAACGATGTTGAAGCAACCACAAGATTCTGACATTCAGTTTAATACTCCAGGGCAAAGCTTTCAACCTCAGTCTCTTGGACCCCCACGACCATTTAACCAAATTCATGAGCCTCCTTTCCATGCTGGAGCATCTAATTTGTCTCGCCCTGGGGGCCCTCAATTTGGTGCACCACTTCCTGGAGATATGCATGGTCGAATGCCAGCCAACTTACCACCATATGCTCCTGAAGGTTTTGGTTTGCAGGATGAAAGGTTCAAACCTTTCCATGCTCCAAATCAACAAAATATTGATAGAAGAGAGTTTGATGATGATCTTAAGAAATTCTCTAGGCTTCCTTTGGATTCCGAGCCAGTTTCTAAATTTGGAAATTATTCATTAGGTGCACATGAAGCTGGAAAGAGACCAGTTGGTATTCATGACGATGTCATTAAGAAATCAGGTTCTGCTCTTCATCCTGGTTATCTTGGACCAGGTCCTGGATATGGGAGACATCATATGGATGGTATTGCTCCAAGAAATCCTGTTAGTGAATATGCTGAGATGTCCTCCCGGAGATTGGGGCCCCACCCTGGCAGTCTTGTTGGGAAGTCAAGCATAGATGATTTTGATGGCAGAGTTGCACGTCGTTTTGGTGAATTCCGTGATAGCCGGTTTCCTCATTTTCCTAGCCATTTGCATAGAGATGAATTTGATGGTTTTGGTAACTTTCGAATGGGTGAACATCCAAGGAGTGGTGATTTCATTGGTCAAGATGAATTTGCTGGCCATTTTCGGAGGGGTGAACATTTGGGTCCACATAATTTTCCTAGACATATGCAGCTTGGGGAGCCTATTGGTTTTGGTGCCCACCCTGGTCATATGAGAGCAGTTGAACATGGTGGTTTTCGTAGTTTTGAGTCTTTCAGCAAAGGCGGCCACCCAGGTCATCCGCAACTTGGTGAGCCTGGGTTCAGGAGCAGCTTTTCTCTTCCAGGATTTCCTAATGATGCTGGATTTTTAACAGGAGATATCAGGTCGTTTGATAATTTGAGGAGAAGGAAGGCTTCTAGCATGGGGTGGTGTCGGATATGTAAAGTTGACTGTGAAACAGTAGAAGGTTTGGACTTGCATTCGCAAACAAAGGAGCACCAGAAGATGGCCATGGATATAGTTAAAACAATCAAACAAAATGCAAAGAAACAGAAATTAATACCCAGTGAACAACCCTCAATTGATGAGGGAAAAAAGACACACAATACTGGCATTGAGGGTCGTGGAAATAAGCATTGA 3960 0.4548 MGFDNECIVNIQSLAGEYFCPVCRLLVFPNEASQSQCTHLYCKPCLTYVVSTTRACPYDGYLVTEADSKPLTESNKALAETIGKIAVHCLYHRSGCTWQGTLSECTSHCSGCAFGNSPVVCNRCGIQIVHRQVQEHAQNCPGVQSQVQQVATTQDPSATAAVASTDHNQNAPPVAATASQAPTSQTAVTTTMPGQVSNQLTNPASQTQALVQTAGQPTAEQWYQQQQYQQYYQQYPGQDPYQQQYQQYYPYQQSAVPQYQQAYGQLQPQSQSQPQPQAQHQSQPQLQPQPQVQGLSHPPTHIQASLAPPSQNQMQVQQPPQQLQPAVQPHGPTSHAPGHGQTLSQSQTQPYPYPQVQSHSVQPQSQQPMQMPPYQQPHPQMQHSQPVQKYHVPQSQVHVQLQPNAPIQHHSQLPMPPHQPVTPNVQLQVQNATSHSVSGHHSYPQPPPHPNMQPGVPQHTMHMHPQSGPQPHAQHPVQMQNQFPPQIPTARPNQSHAMFPNQQQPALLPSSVQGQTTPPLQQQPVYAHNQQPGQINQHPTLPPIQQIPQQPFAQHQMPMPSHLRPQGPAHSFPKHAYPQSQGNTALSNSVQHSQSQNAAGRPLVPNHAGHLQPFSQSANTIPVRSGQNGAGYLPENQKLLVGTNNQVQLPSELQSRAPESIERQGDVVEQQTASASGKLGKVYKDLDSVSGSANESKTEKVEADLKPIEVGNKQSSEDPHSLKTSVPNANAGENGDSVNKNHGMGEAAESNWKPSSGNKSGGAMHGVQNDSNEHSVQGNEFQDGHTLKTETKLPESETDKLHNDDNPESSVSQSNGGFAPLSHPATFTDQSKHQQPMINYGPPSVQQRSSAMLASQLPHPTVPNQPLSSVHPSTLIRNHGAAHAPHSGQPLTENFPPTMLKQPQDSDIQFNTPGQSFQPQSLGPPRPFNQIHEPPFHAGASNLSRPGGPQFGAPLPGDMHGRMPANLPPYAPEGFGLQDERFKPFHAPNQQNIDRREFDDDLKKFSRLPLDSEPVSKFGNYSLGAHEAGKRPVGIHDDVIKKSGSALHPGYLGPGPGYGRHHMDGIAPRNPVSEYAEMSSRRLGPHPGSLVGKSSIDDFDGRVARRFGEFRDSRFPHFPSHLHRDEFDGFGNFRMGEHPRSGDFIGQDEFAGHFRRGEHLGPHNFPRHMQLGEPIGFGAHPGHMRAVEHGGFRSFESFSKGGHPGHPQLGEPGFRSSFSLPGFPNDAGFLTGDIRSFDNLRRRKASSMGWCRICKVDCETVEGLDLHSQTKEHQKMAMDIVKTIKQNAKKQKLIPSEQPSIDEGKKTHNTGIEGRGNKH 1319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0083 1319 MobiDBLite consensus disorder prediction 376 391 - -
Aed5g0083 1319 MobiDBLite consensus disorder prediction 463 477 - -
Aed5g0083 1319 MobiDBLite consensus disorder prediction 151 186 - -
Aed5g0083 1319 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1A-LIKE 1 1318 - -
Aed5g0083 1319 MobiDBLite consensus disorder prediction 688 850 - -
Aed5g0083 1319 MobiDBLite consensus disorder prediction 431 477 - -
Aed5g0083 1319 MobiDBLite consensus disorder prediction 714 737 - -
Aed5g0083 1319 MobiDBLite consensus disorder prediction 1288 1319 - -
Aed5g0083 1319 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 8 119 IPR013083 -
Aed5g0083 1319 MobiDBLite consensus disorder prediction 751 784 - -
Aed5g0083 1319 ProSitePatterns Zinc finger RING-type signature. 37 46 IPR017907 -
Aed5g0083 1319 MobiDBLite consensus disorder prediction 1299 1319 - -
Aed5g0083 1319 MobiDBLite consensus disorder prediction 807 850 - -
Aed5g0083 1319 SUPERFAMILY RING/U-box 13 73 - -
Aed5g0083 1319 MobiDBLite consensus disorder prediction 261 369 - -
Aed5g0083 1319 MobiDBLite consensus disorder prediction 697 713 - -
Aed5g0083 1319 MobiDBLite consensus disorder prediction 552 614 - -
Aed5g0083 1319 MobiDBLite consensus disorder prediction 576 601 - -
Aed5g0083 1319 MobiDBLite consensus disorder prediction 785 806 - -
Aed5g0083 1319 MobiDBLite consensus disorder prediction 261 391 - -
Aed5g0083 1319 ProSiteProfiles Zinc finger RING-type profile. 20 59 IPR001841 -
Aed5g0083 1319 SUPERFAMILY TRAF domain-like 84 141 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0083 - - gsj:114380210 1734.92