Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0079 ATGGGTCTCTTAGCATTGGGTTTATTGGTTCTGAATGTGTGTGTGGTGTGCAATGGAGGCACAAGCAGCCCCTTCGTTAGGAAAGTTGAGAAGACAGTGGACATGCCACTTGACAGCGATGTGTTTTCTGTTCCTCCTGGTTATAATGCTCCCCAGCAGGTTCATATAACCCAAGGTGACCTTGAGGGGAAAGCAGTGATGGTGTCATGGGTGACCGTGGATGAACCGGGGTCCAGTGAAGTGCGTTACTGGACTGAGAACAGTGACAAGAAGAAGAGTGTAGAAGGAAAATTTGTTACTTATAGGTTCTTCAATTACTCTTCTGGGTTTATTCATCACGCCACCATCAGACATTTGGAGTACGACACCAAATACTACTATGAGGTTGGACTTGGGAACACAGCACGCCAATTTTGGTTTGTGACTCCTCCTCAAGTTGGTCCTGATGTGCCATATACATTTGGTCTCATAGGGGATCTTGGTCAGAGTTTTGATTCAAATAAGACTCTTTCTCACTATGAATTGAACCCAAGAAAAGGACAAACTGTCCTGTTCGTTGGAGATCTCTCTTATGCTGATAACTACCCAAATCATGATAATGTTAGGTGGGATTCATGGGGAAGGTTTACAGAAAGGAGTGTTGCTTATCAACCATGGATATGGACTGCAGGGAACCATGAAATTGATTTTGCTCCAGAAATTGGTGAAACCGTACCTTTCAAGCCTTATACCCACCGTTACCATGTTCCTTATAGAGCATCTCAGAGTACTTCTCCCTTCTGGTATTCTATCAAGAGAGCTTCAGCACACATCATTGTTTTGGCCTCATATTCAGCATATGGAAAATATACACCACAATATAAATGGCTTGAAGAGGAGCTACCGAAAGTTAACAGGTCAGAGACTCCTTGGTTGATTGTTCTCATGCATTCACCTTGGTATAATAGCTACAACTATCACTATATGGAAGGGGAAACAATGAGAGTAATGTATGAGCCCTGGTTTGTGAAGTACAAGGTTGATATTGTGTTTGCTGGTCATGTTCATGCCTATGAACGATCTGAGCGTGTTTCCAATGTTGCATACAATGTTGTAAATGGTCTTTGCGCTCCAGTAAAAGACCAATCAGCTCCTGTGTATATAACCATTGGTGATGGAGGAAACCTTGAAGGCTTAGCAACCAACATGACAGAACCACAGCCAGAGTATTCTGCATACCGAGAGGCCAGCTTTGGACATGCCATTTTTGACATCAAGAACCGAACTCATGCTCACTACGGCTGGCACCGAAATCAAGATGGAGTTGCTGTGGAGGCTGATTCCGTTTGGTTTTTCAACAGATACTGGCATCCACTTGATGATTCCACCGCTCATGTTTCACATTAA 1386 0.4351 MGLLALGLLVLNVCVVCNGGTSSPFVRKVEKTVDMPLDSDVFSVPPGYNAPQQVHITQGDLEGKAVMVSWVTVDEPGSSEVRYWTENSDKKKSVEGKFVTYRFFNYSSGFIHHATIRHLEYDTKYYYEVGLGNTARQFWFVTPPQVGPDVPYTFGLIGDLGQSFDSNKTLSHYELNPRKGQTVLFVGDLSYADNYPNHDNVRWDSWGRFTERSVAYQPWIWTAGNHEIDFAPEIGETVPFKPYTHRYHVPYRASQSTSPFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVKYKVDIVFAGHVHAYERSERVSNVAYNVVNGLCAPVKDQSAPVYITIGDGGNLEGLATNMTEPQPEYSAYREASFGHAIFDIKNRTHAHYGWHRNQDGVAVEADSVWFFNRYWHPLDDSTAHVSH 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0079 461 CDD MPP_PAPs 148 446 IPR041792 -
Aed5g0079 461 Gene3D - 50 146 - -
Aed5g0079 461 Gene3D - 147 456 IPR029052 -
Aed5g0079 461 PANTHER ACID PHOSPHATASE RELATED 6 458 IPR039331 GO:0003993
Aed5g0079 461 Pfam Calcineurin-like phosphoesterase 153 351 IPR004843 GO:0016787
Aed5g0079 461 PANTHER PURPLE ACID PHOSPHATASE 6 458 - -
Aed5g0079 461 SUPERFAMILY Metallo-dependent phosphatases 148 454 IPR029052 -
Aed5g0079 461 SUPERFAMILY Purple acid phosphatase, N-terminal domain 32 144 IPR008963 GO:0003993|GO:0046872
Aed5g0079 461 Pfam Purple acid Phosphatase, N-terminal domain 51 140 IPR015914 GO:0003993|GO:0046872
Aed5g0079 461 Pfam Iron/zinc purple acid phosphatase-like protein C 377 435 IPR025733 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0079 Aed-Chr5 598242 601075 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0079 109 434 Miscellaneous Gene Families AT1G13900 26.330 1.01e-20 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0079 K22390 - gmx:100815854 924.08