Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0078 ATGGCCTTCCTTGCAAATGCAATCCCAGCTACGTTGCTGCTTTTGCTGGCTCTTTCTCAATGCGCTTCTGCCCAAACACAAGCTCAGGCTCTTCTCACGTGGAAACAAACTCTCCCTGCCCAATCCATTTTGGACTCATGGTTCATCAATTCCACTGCAACTGCACCTGCAAGCCCATGTTCATGGCGAGGCATCACTTGTGATTCTCAAGGCACTGTCACTGTAATAAACTTGGCTTACACGGGACTCTCCGGTACCCTTCAAAACTTGAACTTTTCTGTTTTTCCTAACCTTCTTCGTCTTGATCTCAAAGTAAACAACCTCACTGGCCCCATACCACAAAACATTGGACTGCTCTCAAAGCTCCAATTCCTTGATCTTTCCACCAACTATTTCAACGAAACTCTGCCTCTTTCCATTGCCAATTTGACTCAAGTTTATGAGCTTGATGTGTCAAGAAATGATATAAGAGGGATATTAGACCCTCGGTTATTTCCTGATGGGTCTGATCGACCCAAAAGTGGCCTCATTGCTATAAAAAATCTCCTCTTCCAAGACACCTTGCTGGGTGGCAGAATCCCAAATGAAATAGGAAACATAAAAAACTTGACTTTGCTAGCTTTAGATGGAAACAACTTCTTTGGGCCTATTCCTCAATCTCTAGGCAACTGCACACATTTAAGCATTCTTAGGATGCCTCAAAACCAACTCTCAGGCCCAATACCCCCAAGTATTGGGAAATTAACCAATCTAACCGATACACTTATCTTGTATCATATCATATGCTTCACCATAGTGATTGTTTTCCCTTGCATAACAAGCAATGTATTGAGTGAAATGCCTTTTGATTTGGCAATTGCACATGCAAGTGACCTTAAGGCAAACGTTGAGGAACTAAGAACAAATCCTAATAGGAAACCAATGACCAAACTCTCCAAAGTAATCCTGCCACAAATCACTTTCAATCCAAACTCTGATATCCCTTATGCCAAGCTAAAGACAAAGCAGAGGCAATGTCCAAACGAGACGTAA 1032 0.4244 MAFLANAIPATLLLLLALSQCASAQTQAQALLTWKQTLPAQSILDSWFINSTATAPASPCSWRGITCDSQGTVTVINLAYTGLSGTLQNLNFSVFPNLLRLDLKVNNLTGPIPQNIGLLSKLQFLDLSTNYFNETLPLSIANLTQVYELDVSRNDIRGILDPRLFPDGSDRPKSGLIAIKNLLFQDTLLGGRIPNEIGNIKNLTLLALDGNNFFGPIPQSLGNCTHLSILRMPQNQLSGPIPPSIGKLTNLTDTLILYHIICFTIVIVFPCITSNVLSEMPFDLAIAHASDLKANVEELRTNPNRKPMTKLSKVILPQITFNPNSDIPYAKLKTKQRQCPNET 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0078 343 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 8 256 - -
Aed5g0078 343 Gene3D Ribonuclease Inhibitor 105 169 IPR032675 -
Aed5g0078 343 SUPERFAMILY L domain-like 26 253 - -
Aed5g0078 343 Pfam Leucine rich repeat N-terminal domain 25 68 IPR013210 -
Aed5g0078 343 Gene3D Ribonuclease Inhibitor 19 104 IPR032675 -
Aed5g0078 343 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 8 256 - -
Aed5g0078 343 Gene3D Ribonuclease Inhibitor 172 282 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0078 Aed-Chr5 590539 594244 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0078 14 258 Receptor kinase-like Gene Family AT4G08850 37.226 4.87e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0078 - - aprc:113866080 402.134