Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0065 ATGTCGAAGGATAAAGACGCTACCAATCTCTCGCGCACCTTCAAGTACCTATTAGCTACTCAGTTCTTGTCGAGAGGAATTCCATTTATATTCAACACATGGATTGTAAGGCATCTTACACAAGAGGACTATGCGCCGGGAGGGCTTTCGACGAGCATGCTTGCGGATGGACCTGAAATGCTAATGAAAGTAGTGTGGATGAGTTTCCCACTTGGAATATTTATTACAATTGTAGTATGCTATTTTGTCTTCTGGTGGCAACAAATAAGTTATTCTAGTCCACATGGGCAAGCTATCTTGATCAATGGTTTTGCGTGCATTTTGGAGCTCCTGGCTGAGCCTGTGTATATTCTTTCACAGAACTTGGTCTTGCTTGAATTACGGCTGATGGTTGAGACTGTAGCTACTCTGTCGCGGTGCTTGACAATAGAAGGAAAAGTGATTGATTTTGACCAGCAGCTGTCCAAGATGTGTATACTGTTTACCTTTCAATCCTTTCGAAAATTGATCCTTCAAGAAGGAGAAAAGATAGTACTTGTATGGTTGGATACACCTTATAATCAAGCAGTATATGGCCTGGTGGACAAACTAGGTAGCTTAGTGGTGAGACTTGTCCTTTTACCTTTTGAAGAAAGTTCATATGCAACATTTGCGAGGTCTGCTTCAGGACAGTATCCAGGAAAAAGCAAGAAATTGAGAAATGGCTTGACAGAATCCCTTAAGTTAGTTTTGTTGATTGGCCTTGTTTTTATGGCATTTGGTCCGAGTTATTCTTATTCATTCATTAGATTGCTTTATGGTGAAAAATGGAGTGATGGAGAAGCATCAACTGCCCTCCGCTGTTATTGCTTTTATGTCATTGTTTTGGCCATGAATGGAACCTCTGAAGCCTTTATGCATGCAGTTGCAACAGAGAGTCAACTCAAGCGTTCAAATGATTCACTACTTATATTCTCTTTGATCTATATAGTTTTGAATGTCCTGCTAATAAGGTTAGCTGGGGCAGTTGGCTTGATTATGGCAAATTCTCTCAATATGACCTTGAGGATTATATACTCTGCTATATTCATAAAGAGTTACTTCCAGGGATCTTCCACGTTTTCTTTCCGTGGATGCTTGCCTTCGGGATGGATTACTCTGTTACTTTCAGGCGTAATCACTCTCATTTCTGAGAATGTATTTTTGGACCGAGATAATTTCTGGCCTTCATTTATGGTTCATCTCTCTGTTGGGCTGGCTTGCTTCTGTGTGTCATCATATGTGATCTATTGCCGGGAAAAGCCTTTCATCAGAAGAATTATTCGGTTTAATGATCATGTGGACTGA 1326 0.405 MSKDKDATNLSRTFKYLLATQFLSRGIPFIFNTWIVRHLTQEDYAPGGLSTSMLADGPEMLMKVVWMSFPLGIFITIVVCYFVFWWQQISYSSPHGQAILINGFACILELLAEPVYILSQNLVLLELRLMVETVATLSRCLTIEGKVIDFDQQLSKMCILFTFQSFRKLILQEGEKIVLVWLDTPYNQAVYGLVDKLGSLVVRLVLLPFEESSYATFARSASGQYPGKSKKLRNGLTESLKLVLLIGLVFMAFGPSYSYSFIRLLYGEKWSDGEASTALRCYCFYVIVLAMNGTSEAFMHAVATESQLKRSNDSLLIFSLIYIVLNVLLIRLAGAVGLIMANSLNMTLRIIYSAIFIKSYFQGSSTFSFRGCLPSGWITLLLSGVITLISENVFLDRDNFWPSFMVHLSVGLACFCVSSYVIYCREKPFIRRIIRFNDHVD 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0065 441 Pfam Rft protein 146 434 IPR007594 GO:0006488|GO:0016021
Aed5g0065 441 Pfam Rft protein 61 143 IPR007594 GO:0006488|GO:0016021
Aed5g0065 441 PANTHER ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED 147 438 IPR007594 GO:0006488|GO:0016021
Aed5g0065 441 PANTHER ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED 61 143 IPR007594 GO:0006488|GO:0016021
Aed5g0065 441 PANTHER ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED 4 45 IPR007594 GO:0006488|GO:0016021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0065 K06316 - gmx:100817452 765.763