Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0064 ATGGCTCTTCTCACTTTCCCTCACTTTTTCTCTCATTTTCCCTCAAACACTCGCTCCTTCTCTTCAACTCGGCGCTACTGTTCGATGACGCCAAAAGGAACGGCCATTCTGTGGTTCAAGCACGATCTCCGAACGGACGATCACCCTGCGCTCCTCTCAGCTTCCACATTTCGATCACTGGTTCCTATTTACGTCTTCGATCACCGCATTCTTTCCCGTTTTTCCGATGAGACGCTGGAACTTGTTCTGCTTGCCGTGGAGGATTTGAGGAAGTCGTTGAAGGATCGCGGCTCCGATTTGATGATCAGATTCGGCAATGCGGAGAACGTCATTCAGCAACTTGCAACGGATGTCAGAGCCACTTGTGTGTTTGCGGAACAAGAGGTGGAGTGTGAGCTGCGTTTCATCATAGACGTGGTCAAGCAGCGTTTGAAGTCCGTCACAGTTCCGCAAGGGACTCCGAGGATTGAATTGTGGCAAACTCCATTTTATGATTTAATAAAGGATCTGGAAAATCTTCCTGCATCATATGATGAGTTTAAGAAACTTCAACTCCCTGTGACTACACCACTTCAGCTGTCAGTGTCAAAGATACCTGGTGCAGAAATAGAATTGGACTGGGGTGTTCTTCCTTCATATGATGATATAAAGGGATTTATGACTAGCAACCAACGGAAATCAGGAGAGAATTGGAGCTTAATTAAGGAGACATCAGCTGAAACCATTTTACGCCAAAAAATATTGAAATCTGGCAATACCATTGAAAGAAGTTCTAGCTTTGGGCAAACTCAATCAAGGGAACGTAATGGATCTGTTTTTGTGACACAAAAAGGAAATGTTGTAGGAGGTTGTACAAACAATGTACTGAATGCATTGGCTGCATATCTGAGATATTTGGAGGGAACAGCTCGTGATGACTGGCAAGAGGTACATGAAAAAGTGCGTACTTTTGAAAATCGGAATGGAGCATCATTTATTGGGCTATTCGGCCCTGCCCTATCTCTTGGCATTATATCTAGAAGAAGAGTACATTATGAAGCTATCAAATATGAGAAAGAACGAAATGCAGGTTTCTTATCACCCTTTGGATATTCAGGTGCCACAATTGCAGCAGCAGTTAACGCTGTGTGCTCGATGGAGTGGTATTGGCTTATGGCTTTGAAAAATCAGATAAATAATGACGGAATACATTCAACACGGATATGGAAATGGAAAGGATTTCTTATCCAGTATACAGTTGCTGGTGAAGATGGTCCTGCTATTCTTCTTGTGCATGGTTTTGGTGCCTTTTGGGAGCATTACCGTGACAACATACGTGGTTTAGCTGAATCTGGAAATCGAGTTTGGGCCATTACTATTTTAGGATTTGGCAAATCAGAAAAGCCAAATGTTGCATATACTGAACTCTTGTGGGCTGAACTATTGAGAGATTTTATTGTTGATATTGTGGGTGAACCAGTTCACCTTGTTGGCAACTCAATAGGTGGTTATCTTGTTGCTATTGTTGCTCGTATTTGGAGTGATTTGATCAAATCCATTGTCTTGATCAACAGTGCAGGCAATGTCATCCCAAGATATTCATTCATACCATTGTCTACAATTCAGGATAGACAAACTTCAGGGGCTTCCTGGTTGGGTTCTCGCATACTTCTATTCTATTTGAGGCTAAGAATTCAAGAGTTACTTAAGAAATGTTATCCAACTAGGGTTGAAAGAGCAGATGATTGGCTCGTAAATGAAATGCTAAGAGCATCATATGATCCTGGCGCGCTTGTGGTCTTGGAAAGCATCTTCAGCTTTAATCTTTCCATTCCTATTAACTTTCTTCTTGAAGATGTCAAGGAAAAGGTCCTAATTATACAGGGGACGAAAGATCCAATTTCTGACTCCAATTCCAAGGTGGCCATGCTTAAAGAACATTGTGATGGAGTTATAATTAAGGAGTTAGATGCTGGTCACTGTCCGCACGATGAGGTGCCAGAACGAGTGAATACTATCATTTGTGAGTGGGTACTTGGTGTGGAAAGTCACATTTTGGCAGAGTGTGCAGTGTAA 2055 0.4234 MALLTFPHFFSHFPSNTRSFSSTRRYCSMTPKGTAILWFKHDLRTDDHPALLSASTFRSLVPIYVFDHRILSRFSDETLELVLLAVEDLRKSLKDRGSDLMIRFGNAENVIQQLATDVRATCVFAEQEVECELRFIIDVVKQRLKSVTVPQGTPRIELWQTPFYDLIKDLENLPASYDEFKKLQLPVTTPLQLSVSKIPGAEIELDWGVLPSYDDIKGFMTSNQRKSGENWSLIKETSAETILRQKILKSGNTIERSSSFGQTQSRERNGSVFVTQKGNVVGGCTNNVLNALAAYLRYLEGTARDDWQEVHEKVRTFENRNGASFIGLFGPALSLGIISRRRVHYEAIKYEKERNAGFLSPFGYSGATIAAAVNAVCSMEWYWLMALKNQINNDGIHSTRIWKWKGFLIQYTVAGEDGPAILLVHGFGAFWEHYRDNIRGLAESGNRVWAITILGFGKSEKPNVAYTELLWAELLRDFIVDIVGEPVHLVGNSIGGYLVAIVARIWSDLIKSIVLINSAGNVIPRYSFIPLSTIQDRQTSGASWLGSRILLFYLRLRIQELLKKCYPTRVERADDWLVNEMLRASYDPGALVVLESIFSFNLSIPINFLLEDVKEKVLIIQGTKDPISDSNSKVAMLKEHCDGVIIKELDAGHCPHDEVPERVNTIICEWVLGVESHILAECAV 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0064 684 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 34 192 IPR036155 -
Aed5g0064 684 SUPERFAMILY alpha/beta-Hydrolases 398 671 IPR029058 -
Aed5g0064 684 Gene3D HUPs 10 165 IPR014729 -
Aed5g0064 684 Gene3D alpha/beta hydrolase 392 672 IPR029058 -
Aed5g0064 684 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 33 166 IPR006050 -
Aed5g0064 684 Pfam DNA photolyase 36 146 IPR006050 -
Aed5g0064 684 Pfam Alpha/beta hydrolase family 421 664 IPR000073 -
Aed5g0064 684 PANTHER DNA PHOTOLYASE 26 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0064 Aed-Chr5 455602 460808 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0064 406 514 Acyl Lipid Metabolism Gene Families AT2G26740 31.356 3.62e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0064 - - gmx:100813721 1256.12