Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0056 ATGGAGAGTGCTTTTGCAAGCGCTTCTGCGATTGCAGACCAGCGGCAAAAGATAGAACAGTATAAACAAATACTTGCTGCTGTCATTTCATCTAATGACATTGCTCAGGCTATGAAATTCATAAATCACAATGATGTTCCATTAGTAGTGTCTCGGCAGCTTTTGCAGACTTTTGCTCAAGAGTTGGGAAGATTGGAGCCTGAGATACAGAAAGAGATTGCCCATTACACACTTGCCCAAATTCAGCCTCGTGTTGTGTCATTTGAAGAGCAGGTTTTAGTTATTAGAGAGAAACTTGCTGAGCTTTATGAATCTGAGAAGCAATGGTCAAAAGCTGCTCAAATGCTCAGTGGTATTGACCTAGATTCAGGAATGAGGGTGATTGATGATGCATTCAGGTTGTCAAAGTGTGTCCAAATTGCTTGTTTATATCTTGAGGATGATGACGCTGTCAATGCCGAGGCTTTTATTAATAAAGCATCATTCTTGGTCAGCAATAGTCAGCATGAAGTACTGAATTTAAAGTACAAGGTTTGTTATGCAAGGATCTTAGATTTGAAGAGGAAGTTTTTGGAAGCAGCATTACGATATTATGATATATCTCAAATTGAGAAAAGGCAAATAGGAGACGAGGAGATTAATGAGGAAGCGCTTGAACAAGCTTTATCTGCTGCTGTTACATGCACGATATTGGCAGCTGCAGGACCTCAACGTTCTCGTGTTCTTGCCACTTTGTACAAGGATGAGCGGTGTTCAAAGTTGAAGATCTATCCAATATTGCAGAAGGTGTATTTGGAGAGAATTCTCAGAAAACCAGAAATTGATGCTTTTGCAGAAGAATTGAAACCACATCAGTCGGCATGCCTCAGCTTTTACTTTTTCCCACAGCAAGCTCTTCTTCCAGATAATTTCACTGTGCTGGACCGAGCTATGATTGAGCATAATCTTCTGAGTGCAAGCAAACTTTATACTAATATCAGCTTTGATGAACTAGGCACACTGTTGGGGATCCCACCTCACAAGGCCGAGAAGATAGCATCAAGAATGATTTATGAGGATAGGATGAGGGGCTCTATCGATCAGGTTGAAGCTGTTATACATTTTGACGATGACACTGAAGAGTTGCAGCGATGGGACCAGCAGATTGTGGGCCTATGTCAAGCCCTCAACGATGTTTTGGATAGCATGGCCAAGAAGGGTTTTCCCGTTCCTGTATAA 1218 0.4154 MESAFASASAIADQRQKIEQYKQILAAVISSNDIAQAMKFINHNDVPLVVSRQLLQTFAQELGRLEPEIQKEIAHYTLAQIQPRVVSFEEQVLVIREKLAELYESEKQWSKAAQMLSGIDLDSGMRVIDDAFRLSKCVQIACLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLKYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEINEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQSACLSFYFFPQQALLPDNFTVLDRAMIEHNLLSASKLYTNISFDELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQVEAVIHFDDDTEELQRWDQQIVGLCQALNDVLDSMAKKGFPVPV 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0056 405 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4 1 405 IPR040134 -
Aed5g0056 405 PANTHER COP9 SIGNALOSOME COMPLEX SUBUNIT 4-LIKE 1 405 - -
Aed5g0056 405 SMART PINT_4 302 385 IPR000717 -
Aed5g0056 405 Pfam PCI domain 265 369 IPR000717 -
Aed5g0056 405 ProSiteProfiles PCI domain profile. 189 373 IPR000717 -
Aed5g0056 405 Gene3D - 300 377 IPR036388 -
Aed5g0056 405 SUPERFAMILY "Winged helix" DNA-binding domain 300 374 IPR036390 -
Aed5g0056 405 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 302 385 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0056 K12178 - gmx:100819593 737.258