Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0053 ATGGTCCTTGAATTAATTAATTTGTTTCTGGATCCGTCGACTTTAATTAGATTGGAACCACCCACCAATCCATATATATATAAGTTTCATTTCTATCTGCTCATTATCATTATGGCAGCCATGAACCCTACTGATTTTGGTCCAGAAATTCCCTTGCTGAATGATCCAAGTAGTTCCCTACTGCAAAAGGGTATCACCACCCTTGTCGTCTCCATCGTTTTCCTAATCTCATTGTTTGCAGCACTACTAGTTATCATAAACTTGCCTTTAGAAAACAATATCACAAGTTCATTAATAGAGCCTCCTAGAGGGGTTGCTGAGGGTGTTTCAGCCAAGTCAAACCCGTATCTTTCACATTCCAGTGCTTCATATAATTGGACAAATGCCATGCTTTCTTGGCAAAGAACAGCTTTCCATTTTCAACCTCAAATGAACTGGATGAACGGTCCATTGTTTTACAAGGGGTGGTACCATATATTTTATCAATACAATCCCGATTCAGCGGTGTGGGGCAACATAACATGGGGCCACGCTGTATCGAGGGACTTGATTCACTGGCTCCACCTTCCCATTGCATTGGTCCCAGACACGTGGTTTGACATCAACGGTGTTTGGTCTGGCTCAGCCACCCTTTTTCCAGATGGCAGAATCATAATGCTCTACACGGGTAATACCGATCAAAACGTGCAAGTGCAGAATCTTGCGTACCCCGCCAACCTATCTGATCCCCTCCTCCTTGATTGGGTTAAATACGCTGATAACCCGGTCTTGGTGCCGCCACCTGGCATTGGATCAAAGGATTTTCGTGACCCAACTACTGCGTGGATTGGGCCGGATGAGAAATGGAGGCTCACTATTGGGTCAAAGGTCAACAAGACCACAGGTCTTTCATTGGTTTATAAAACCAAAGATTTCATCCACTATAAGCAAAATGATCACTATTTGCATCAAGTCCCCGGAACGGGTATGTGGGAATGCGTGGACTTTTACCCGATTTCAATAAATGGGCCTAACGGTTTGGATACATCTGAAAATGGGCCAGATGTGAAGCATGTGTTGAAGGCTAGTTTGGACGACACAAAGGTGGATTATTATGCAATTGGAACCTACTTCATTGAAAATGATACATGGATACCCGACAATCCGCATAAGGATGTGGGTATCGGGTTCAAATTGGACTATGGGAGATACTATGCCTCAAAGACATTTTATGACCAAAACAAACAAAGAAGGATTTTGTGGGGTTGGATTAATGAATCAGATAGTGAAACCGCTGACCTCAAAAAGGGTTGGGCATCTCTCCAGACTATTCCAAGAACAGTGGTGTTTGACAAGAAGACAAGAAGTAATTTGGTTCATTGGCCAGTGGAAGAAGTAGAAAGCTTACGGCTTAGCAGTTCTGAATTTGAAGGAGTTGTGGTTAAACCTGGCTCAGTTTTGCCACTGGACATAGGCCCAGCCACACAGTTGGACATATTTGCTGAATTTGAAATCGAAAACTTAGCATCCAAAGGGATTGGCAAGGACAGTGTAGGATGTGGAAATGGAGCTGTTGACAGAAGTGCTTTGGGACCATTCGGTATTCTGGCTATTGCAGATGACCAACTTTCTGAACTAACACCAATTTATTTCCATCTTTCTTCTACTACTACTAGCGATGGCAGTTTAACCACTTCCTTCTGTGTTGATGAAACTAGGTCATCAAAGGCTCCTGATGTTTCAAAGCTTGTTTTTGGAAACAAAGTTCCAGTTCTCAGTGATGAAAAATTATCAATGAGGGTATTGGTGGACCATTCAATAATTGAGAGCTTTGCTCAGGGAGGGAGAACAGTGATCTCATCTAGAGTTTATCCAACAGAAGCAATATATGGAGCTACAAGATTGTTTCTGTTCAACAATGCAACTGACATAAACATCAAGGCCTCTCTCAATATTTGGCAATTGAACTCAGCTTTTATACGCCCCTTTCCCTTGTGA 1977 0.4259 MVLELINLFLDPSTLIRLEPPTNPYIYKFHFYLLIIIMAAMNPTDFGPEIPLLNDPSSSLLQKGITTLVVSIVFLISLFAALLVIINLPLENNITSSLIEPPRGVAEGVSAKSNPYLSHSSASYNWTNAMLSWQRTAFHFQPQMNWMNGPLFYKGWYHIFYQYNPDSAVWGNITWGHAVSRDLIHWLHLPIALVPDTWFDINGVWSGSATLFPDGRIIMLYTGNTDQNVQVQNLAYPANLSDPLLLDWVKYADNPVLVPPPGIGSKDFRDPTTAWIGPDEKWRLTIGSKVNKTTGLSLVYKTKDFIHYKQNDHYLHQVPGTGMWECVDFYPISINGPNGLDTSENGPDVKHVLKASLDDTKVDYYAIGTYFIENDTWIPDNPHKDVGIGFKLDYGRYYASKTFYDQNKQRRILWGWINESDSETADLKKGWASLQTIPRTVVFDKKTRSNLVHWPVEEVESLRLSSSEFEGVVVKPGSVLPLDIGPATQLDIFAEFEIENLASKGIGKDSVGCGNGAVDRSALGPFGILAIADDQLSELTPIYFHLSSTTTSDGSLTTSFCVDETRSSKAPDVSKLVFGNKVPVLSDEKLSMRVLVDHSIIESFAQGGRTVISSRVYPTEAIYGATRLFLFNNATDINIKASLNIWQLNSAFIRPFPL 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0053 658 SUPERFAMILY Arabinanase/levansucrase/invertase 132 456 IPR023296 -
Aed5g0053 658 Pfam Glycosyl hydrolases family 32 C terminal 458 647 IPR013189 -
Aed5g0053 658 SUPERFAMILY Concanavalin A-like lectins/glucanases 455 652 IPR013320 -
Aed5g0053 658 SMART glyco_32 139 608 IPR001362 GO:0004553|GO:0005975
Aed5g0053 658 Gene3D - 467 648 - -
Aed5g0053 658 Gene3D Glycosyl hydrolase domain; family 43 143 466 IPR023296 -
Aed5g0053 658 Pfam Beta-fructofuranosidase, N-terminal domain 99 131 IPR021792 GO:0004564
Aed5g0053 658 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 92 656 - -
Aed5g0053 658 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 92 656 - -
Aed5g0053 658 CDD GH32_Fruct1-like 145 441 - -
Aed5g0053 658 Pfam Glycosyl hydrolases family 32 N-terminal domain 139 455 IPR013148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0053 Aed-Chr5 403586 407527 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0053 63 656 Glycoside Hydrolase AT1G12240 59.416 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0053 K01193 - gmx:100814788 1084.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0053 5 403586 407527 Aed5g0053 5 403586 407527 ECH